RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 DDX11L8A8MPP1 907 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 DKC1O60832 514 aaKnown RBP eCLIP30.56■■■□□ 2.48
SMAD4-213ENST00000591914 MCM2P49736 904 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 TMEM266Q2M3C6 531 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 NCAPH2Q6IBW4 605 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 RTN4RL1Q86UN2 441 aaPredicted RBP30.56■■■□□ 2.48
SMAD4-213ENST00000591914 ZNF710Q8N1W2 664 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 YME1L1Q96TA2 773 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 ERVK-5Q9HDB9 667 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 WRAP73Q9P2S5 460 aaPredicted RBP30.56■■■□□ 2.48
SMAD4-213ENST00000591914 PCDHA12Q9UN75 941 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 AKT3Q9Y243 479 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 TTC3P53804 2025 aa30.56■■■□□ 2.48
SMAD4-213ENST00000591914 RPS6KA5O75582 802 aa30.55■■■□□ 2.48
SMAD4-213ENST00000591914 SLC17A8Q8NDX2 589 aa30.55■■■□□ 2.48
SMAD4-213ENST00000591914 PPP1R16BQ96T49 567 aa30.55■■■□□ 2.48
SMAD4-213ENST00000591914 OSMRQ99650 979 aa30.55■■■□□ 2.48
SMAD4-213ENST00000591914 TSPYL2Q9H2G4 693 aaPredicted RBP30.55■■■□□ 2.48
SMAD4-213ENST00000591914 ADAMTS10Q9H324 1103 aa30.55■■■□□ 2.48
SMAD4-213ENST00000591914 TMX1Q9H3N1 280 aa30.55■■■□□ 2.48
SMAD4-213ENST00000591914 SUGCTQ9HAC7 445 aa30.55■■■□□ 2.48
SMAD4-213ENST00000591914 IGKV6-21A0A0C4DH24 114 aa30.54■■■□□ 2.48
SMAD4-213ENST00000591914 RFXAPO00287 272 aa30.54■■■□□ 2.48
SMAD4-213ENST00000591914 IGFBP4P22692 258 aa30.54■■■□□ 2.48
SMAD4-213ENST00000591914 ERVK-21P61565 698 aa30.54■■■□□ 2.48
SMAD4-213ENST00000591914 NOSTRINQ8IVI9 506 aa30.54■■■□□ 2.48
SMAD4-213ENST00000591914 TGS1Q96RS0 853 aaKnown RBP30.54■■■□□ 2.48
SMAD4-213ENST00000591914 SH2D3AQ9BRG2 576 aa30.54■■■□□ 2.48
SMAD4-213ENST00000591914 LXNQ9BS40 222 aa30.54■■■□□ 2.48
SMAD4-213ENST00000591914 TTC12Q9H892 705 aaPredicted RBP30.54■■■□□ 2.48
SMAD4-213ENST00000591914 RGL1Q9NZL6 768 aa30.54■■■□□ 2.48
SMAD4-213ENST00000591914 NLRP11P59045 1033 aaKnown RBP30.53■■■□□ 2.48
SMAD4-213ENST00000591914 NFX1Q12986 1120 aaKnown RBP30.53■■■□□ 2.48
SMAD4-213ENST00000591914 ODR4Q5SWX8 454 aa30.53■■■□□ 2.48
SMAD4-213ENST00000591914 C4orf19Q8IY42 314 aa30.53■■■□□ 2.48
SMAD4-213ENST00000591914 CRIPAKQ8N1N5 446 aa30.53■■■□□ 2.48
SMAD4-213ENST00000591914 BACH2Q9BYV9 841 aa30.53■■■□□ 2.48
SMAD4-213ENST00000591914 TMEM60Q9H2L4 133 aa30.53■■■□□ 2.48
SMAD4-213ENST00000591914 GPR182O15218 404 aa30.52■■■□□ 2.48
SMAD4-213ENST00000591914 MAFO75444 373 aaPredicted RBP30.52■■■□□ 2.48
SMAD4-213ENST00000591914 ATP2B1P20020 1258 aa30.52■■■□□ 2.48
SMAD4-213ENST00000591914 POU3F3P20264 500 aaPredicted RBP30.52■■■□□ 2.48
SMAD4-213ENST00000591914 U2AF2P26368 475 aaKnown RBP eCLIP30.52■■■□□ 2.482e-6■■■□□ 17.2
SMAD4-213ENST00000591914 MCM7P33993 719 aa30.52■■■□□ 2.48
SMAD4-213ENST00000591914 ORC2Q13416 577 aaPredicted RBP30.52■■■□□ 2.48
SMAD4-213ENST00000591914 PLA2G4FQ68DD2 849 aa30.52■■■□□ 2.48
SMAD4-213ENST00000591914 DYDC2Q96IM9 177 aa30.52■■■□□ 2.48
SMAD4-213ENST00000591914 CYP26B1Q9NR63 512 aa30.52■■■□□ 2.48
SMAD4-213ENST00000591914 ST3GAL5Q9UNP4 418 aa30.52■■■□□ 2.48
SMAD4-213ENST00000591914 KIF3AQ9Y496 699 aa30.52■■■□□ 2.48
SMAD4-213ENST00000591914 COL4A4P53420 1690 aaPredicted RBP30.52■■■□□ 2.48
SMAD4-213ENST00000591914 TXKP42681 527 aa30.51■■■□□ 2.47
SMAD4-213ENST00000591914 GPC3P51654 580 aa30.51■■■□□ 2.47
SMAD4-213ENST00000591914 DRP2Q13474 957 aa30.51■■■□□ 2.47
SMAD4-213ENST00000591914 GNL2Q13823 731 aaKnown RBP30.51■■■□□ 2.47
SMAD4-213ENST00000591914 FAM228AQ86W67 206 aa30.51■■■□□ 2.47
SMAD4-213ENST00000591914 ZSWIM4Q9H7M6 989 aa30.51■■■□□ 2.47
SMAD4-213ENST00000591914 RC3H2Q9HBD1 1191 aaKnown RBP30.51■■■□□ 2.47
SMAD4-213ENST00000591914 PPME1Q9Y570 386 aa30.51■■■□□ 2.47
SMAD4-213ENST00000591914 SLITRK3O94933 977 aa30.5■■■□□ 2.47
SMAD4-213ENST00000591914 TRAPPC10P48553 1259 aa30.5■■■□□ 2.47
SMAD4-213ENST00000591914 NPEPPSP55786 919 aa30.5■■■□□ 2.47
SMAD4-213ENST00000591914 CYP4A11Q02928 519 aa30.5■■■□□ 2.47
SMAD4-213ENST00000591914 HSD17B14Q9BPX1 270 aa30.5■■■□□ 2.47
SMAD4-213ENST00000591914 EIF2AK1Q9BQI3 630 aaKnown RBP30.5■■■□□ 2.47
SMAD4-213ENST00000591914 A0A0C4DFX4 3053 aa30.5■■■□□ 2.47
SMAD4-213ENST00000591914 MGEA5O60502 916 aa30.49■■■□□ 2.47
SMAD4-213ENST00000591914 LPXNO60711 386 aa30.49■■■□□ 2.47
SMAD4-213ENST00000591914 YWHABP31946 246 aaKnown RBP30.49■■■□□ 2.47
SMAD4-213ENST00000591914 DNM2P50570 870 aa30.49■■■□□ 2.47
SMAD4-213ENST00000591914 GRB10Q13322 594 aa30.49■■■□□ 2.47
SMAD4-213ENST00000591914 CTTNQ14247 550 aaKnown RBP30.49■■■□□ 2.47
SMAD4-213ENST00000591914 NPAS4Q8IUM7 802 aa30.49■■■□□ 2.47
SMAD4-213ENST00000591914 ZNF579Q8NAF0 562 aaKnown RBP30.49■■■□□ 2.47
SMAD4-213ENST00000591914 NEK9Q8TD19 979 aa30.49■■■□□ 2.47
SMAD4-213ENST00000591914 JPH2Q9BR39 696 aaPredicted RBP30.49■■■□□ 2.47
SMAD4-213ENST00000591914 MTUS1Q9ULD2 1270 aa30.49■■■□□ 2.47
SMAD4-213ENST00000591914 DGKIO75912 1065 aa30.48■■■□□ 2.47
SMAD4-213ENST00000591914 EIF4BP23588 611 aaKnown RBP30.48■■■□□ 2.47
SMAD4-213ENST00000591914 CDC42EP1Q00587 391 aa30.48■■■□□ 2.47
SMAD4-213ENST00000591914 TTC38Q5R3I4 469 aa30.48■■■□□ 2.47
SMAD4-213ENST00000591914 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.48■■■□□ 2.47
SMAD4-213ENST00000591914 ZNF689Q96CS4 500 aaPredicted RBP30.48■■■□□ 2.47
SMAD4-213ENST00000591914 CEP170P1Q96L14 293 aa30.48■■■□□ 2.47
SMAD4-213ENST00000591914 C17orf80Q9BSJ5 609 aa30.48■■■□□ 2.47
SMAD4-213ENST00000591914 MTCH2Q9Y6C9 303 aa30.48■■■□□ 2.47
SMAD4-213ENST00000591914 ADGRA3Q8IWK6 1321 aa30.47■■■□□ 2.47
SMAD4-213ENST00000591914 REV3LO60673 3130 aa30.47■■■□□ 2.47
SMAD4-213ENST00000591914 LYPLA2O95372 231 aa30.47■■■□□ 2.47
SMAD4-213ENST00000591914 DARSP14868 501 aaKnown RBP30.47■■■□□ 2.47
SMAD4-213ENST00000591914 ZNF174Q15697 407 aa30.47■■■□□ 2.47
SMAD4-213ENST00000591914 OTUD6AQ7L8S5 288 aa30.47■■■□□ 2.47
SMAD4-213ENST00000591914 TPH2Q8IWU9 490 aa30.47■■■□□ 2.47
SMAD4-213ENST00000591914 ZNF668Q96K58 619 aaPredicted RBP30.47■■■□□ 2.47
SMAD4-213ENST00000591914 SAMD11Q96NU1 681 aa30.47■■■□□ 2.47
SMAD4-213ENST00000591914 ADAM2Q99965 735 aa30.47■■■□□ 2.47
SMAD4-213ENST00000591914 DHX33Q9H6R0 707 aaKnown RBP30.47■■■□□ 2.47
SMAD4-213ENST00000591914 RGS18Q9NS28 235 aa30.47■■■□□ 2.47
SMAD4-213ENST00000591914 NOL7Q9UMY1 257 aaKnown RBP30.47■■■□□ 2.47
SMAD4-213ENST00000591914 ARID2Q68CP9 1835 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms