RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 EEF2KMTQ96G04 330 aa11.4□□□□□ -0.58
VPS25-206ENST00000591584 FIZ1Q96SL8 496 aa11.4□□□□□ -0.58
VPS25-206ENST00000591584 A1CFQ9NQ94 594 aaKnown RBP11.4□□□□□ -0.58
VPS25-206ENST00000591584 AIPL1Q9NZN9 384 aa11.4□□□□□ -0.58
VPS25-206ENST00000591584 WRAP73Q9P2S5 460 aaPredicted RBP11.4□□□□□ -0.58
VPS25-206ENST00000591584 SLC9A2Q9UBY0 812 aa11.4□□□□□ -0.58
VPS25-206ENST00000591584 PPME1Q9Y570 386 aa11.4□□□□□ -0.58
VPS25-206ENST00000591584 SSC5DA1L4H1 1573 aa11.4□□□□□ -0.58
VPS25-206ENST00000591584 ASTN1O14525 1302 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 LOXHD1Q8IVV2 1947 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 SFI1A8K8P3 1242 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 EFCAB8A8MWE9 144 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 P4HA2O15460 535 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 ATP9AO75110 1047 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 N4BP1O75113 896 aaKnown RBP11.39□□□□□ -0.59
VPS25-206ENST00000591584 DGAT1O75907 488 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 CCDC172P0C7W6 258 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 TGFB3P10600 412 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 KCNA2P16389 499 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 RFX1P22670 979 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 NMT1P30419 496 aaKnown RBP11.39□□□□□ -0.59
VPS25-206ENST00000591584 VAV2P52735 878 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 MCCD1P59942 119 aaPredicted RBP11.39□□□□□ -0.59
VPS25-206ENST00000591584 IRX3P78415 501 aaPredicted RBP11.39□□□□□ -0.59
VPS25-206ENST00000591584 CETN1Q12798 172 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 MAPK7Q13164 816 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 PLS1Q14651 629 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 EXOC3L4Q17RC7 722 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 RRAGAQ7L523 313 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 PNMA8AQ86V59 439 aaPredicted RBP11.39□□□□□ -0.59
VPS25-206ENST00000591584 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 CEP112Q8N8E3 955 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 ACRBPQ8NEB7 543 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 MCPH1Q8NEM0 835 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 SPIRE2Q8WWL2 714 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 BAP1Q92560 729 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 NTPCRQ9BSD7 190 aaKnown RBP11.39□□□□□ -0.59
VPS25-206ENST00000591584 DEF6Q9H4E7 631 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 JPH1Q9HDC5 661 aaPredicted RBP11.39□□□□□ -0.59
VPS25-206ENST00000591584 LZTFL1Q9NQ48 299 aa11.39□□□□□ -0.59
VPS25-206ENST00000591584 FAM207AQ9NSI2 230 aaPredicted RBP11.39□□□□□ -0.59
VPS25-206ENST00000591584 PHIPQ8WWQ0 1821 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 RBAK-RBAKDNI3L0D1 243 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 K7ENM7 598 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 ZBTB39O15060 712 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 PMM2O15305 246 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
VPS25-206ENST00000591584 AKR1B10O60218 316 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 GRIN3BO60391 1043 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 AKAP3O75969 853 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 ATG7O95352 703 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 CCNE2O96020 404 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 KRT13P13646 458 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 EPHX2P34913 555 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 ARHGAP25P42331 645 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 KLK7P49862 253 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 NEDD9Q14511 834 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 XKR9Q5GH70 373 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 XKR3Q5GH77 459 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 ZNF569Q5MCW4 686 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 INTS8Q75QN2 995 aaKnown RBP11.38□□□□□ -0.59
VPS25-206ENST00000591584 USP37Q86T82 979 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 EXOC8Q8IYI6 725 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 RNF10Q8N5U6 811 aaKnown RBP11.38□□□□□ -0.59
VPS25-206ENST00000591584 BORCS6Q96GS4 357 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 WNK4Q96J92 1243 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
VPS25-206ENST00000591584 NAPGQ99747 312 aaPredicted RBP11.38□□□□□ -0.59
VPS25-206ENST00000591584 LSM14BQ9BX40 385 aaKnown RBP11.38□□□□□ -0.59
VPS25-206ENST00000591584 SPATC1LQ9H0A9 340 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 PDCL3Q9H2J4 239 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 AGPAT3Q9NRZ7 376 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 CDC23Q9UJX2 597 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 ZNF215Q9UL58 517 aaPredicted RBP11.38□□□□□ -0.59
VPS25-206ENST00000591584 AGTPBP1Q9UPW5 1226 aa11.38□□□□□ -0.59
VPS25-206ENST00000591584 ATP8B3O60423 1300 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 SMCHD1A6NHR9 2005 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 ANO9A1A5B4 782 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 GLTPD2A6NH11 291 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 LRRC53A6NM62 1247 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 PJA2O43164 708 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 GFPT2O94808 682 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 NOL4O94818 638 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 TUBBP07437 444 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 EDNRBP24530 442 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 NCKAP1LP55160 1127 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 POLR2FP61218 127 aaKnown RBP11.37□□□□□ -0.59
VPS25-206ENST00000591584 DMP1Q13316 513 aaPredicted RBP11.37□□□□□ -0.59
VPS25-206ENST00000591584 PRKG1Q13976 671 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 WHAMMP3Q1A5X7 153 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 CCDC122Q5T0U0 273 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 KLHDC7AQ5VTJ3 777 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 ABHD15Q6UXT9 468 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 GADL1Q6ZQY3 521 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 DAW1Q8N136 415 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 SMCR8Q8TEV9 937 aaPredicted RBP11.37□□□□□ -0.59
VPS25-206ENST00000591584 UBXN4Q92575 508 aa11.37□□□□□ -0.59
VPS25-206ENST00000591584 SLC35C1Q96A29 364 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms