RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 HTRA4P83105 476 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-212ENST00000590260 CYP4A11Q02928 519 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 ADGRE1Q14246 886 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 CTTNQ14247 550 aaKnown RBP20.46■□□□□ 0.87
DDX39A-212ENST00000590260 KIZQ2M2Z5 673 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 PPP2R2DQ66LE6 453 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 MYOCDQ8IZQ8 938 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 TOP1MTQ969P6 601 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 ZNF668Q96K58 619 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-212ENST00000590260 HSD17B14Q9BPX1 270 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 EIF2AK1Q9BQI3 630 aaKnown RBP20.46■□□□□ 0.87
DDX39A-212ENST00000590260 LXNQ9BS40 222 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 PRDM12Q9H4Q4 367 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 SLC28A3Q9HAS3 691 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 ERVK-5Q9HDB9 667 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 PCDHA12Q9UN75 941 aa20.46■□□□□ 0.87
DDX39A-212ENST00000590260 COL4A4P53420 1690 aaPredicted RBP20.45■□□□□ 0.86
DDX39A-212ENST00000590260 TLL1O43897 1013 aa20.45■□□□□ 0.86
DDX39A-212ENST00000590260 MGEA5O60502 916 aa20.45■□□□□ 0.86
DDX39A-212ENST00000590260 BAG4O95429 457 aaKnown RBP20.45■□□□□ 0.86
DDX39A-212ENST00000590260 TTC38Q5R3I4 469 aa20.45■□□□□ 0.86
DDX39A-212ENST00000590260 C4orf19Q8IY42 314 aa20.45■□□□□ 0.86
DDX39A-212ENST00000590260 OSMRQ99650 979 aa20.45■□□□□ 0.86
DDX39A-212ENST00000590260 PCDHB6Q9Y5E3 794 aa20.45■□□□□ 0.86
DDX39A-212ENST00000590260 RFXAPO00287 272 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 MARCH6O60337 910 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 MAFO75444 373 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-212ENST00000590260 AMHP03971 560 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 TBC1D8BQ0IIM8 1120 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 FAM228AQ86W67 206 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 USP38Q8NB14 1042 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 SP7Q8TDD2 431 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-212ENST00000590260 RAD9AQ99638 391 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 CERS4Q9HA82 394 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 SUGCTQ9HAC7 445 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 CYP26B1Q9NR63 512 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 GINS2Q9Y248 185 aa20.44■□□□□ 0.86
DDX39A-212ENST00000590260 A0A087WWV3 80 aa20.43■□□□□ 0.86
DDX39A-212ENST00000590260 LINC01553A4QN01 128 aa20.43■□□□□ 0.86
DDX39A-212ENST00000590260 SPATA31C1P0DKV0 1188 aa20.43■□□□□ 0.86
DDX39A-212ENST00000590260 TRAPPC10P48553 1259 aa20.43■□□□□ 0.86
DDX39A-212ENST00000590260 GPC3P51654 580 aa20.43■□□□□ 0.86
DDX39A-212ENST00000590260 CRYBB1P53674 252 aaPredicted RBP20.43■□□□□ 0.86
DDX39A-212ENST00000590260 NLRP11P59045 1033 aaKnown RBP20.43■□□□□ 0.86
DDX39A-212ENST00000590260 RC3H2Q9HBD1 1191 aaKnown RBP20.43■□□□□ 0.86
DDX39A-212ENST00000590260 SMC3Q9UQE7 1217 aa20.43■□□□□ 0.86
DDX39A-212ENST00000590260 REV3LO60673 3130 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 TRANK1O15050 2925 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 M0QZ92 97 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 UPP2O95045 317 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 LYPLA2O95372 231 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 OR52Z1P0C646 297 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 YWHABP31946 246 aaKnown RBP20.42■□□□□ 0.86
DDX39A-212ENST00000590260 ORC2Q13416 577 aaPredicted RBP20.42■□□□□ 0.86
DDX39A-212ENST00000590260 IL17AQ16552 155 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 ZBED2Q9BTP6 218 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 DHX33Q9H6R0 707 aaKnown RBP20.42■□□□□ 0.86
DDX39A-212ENST00000590260 ST3GAL5Q9UNP4 418 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 AKT3Q9Y243 479 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 TTC3P53804 2025 aa20.42■□□□□ 0.86
DDX39A-212ENST00000590260 MED24O75448 989 aa20.41■□□□□ 0.86
DDX39A-212ENST00000590260 LINC00271P0C7V0 271 aa20.41■□□□□ 0.86
DDX39A-212ENST00000590260 TECP42680 631 aa20.41■□□□□ 0.86
DDX39A-212ENST00000590260 PAK2Q13177 524 aa20.41■□□□□ 0.86
DDX39A-212ENST00000590260 DSC3Q14574 896 aa20.41■□□□□ 0.86
DDX39A-212ENST00000590260 KSR1Q8IVT5 923 aa20.41■□□□□ 0.86
DDX39A-212ENST00000590260 TPH2Q8IWU9 490 aa20.41■□□□□ 0.86
DDX39A-212ENST00000590260 TSPYL2Q9H2G4 693 aaPredicted RBP20.41■□□□□ 0.86
DDX39A-212ENST00000590260 ZSWIM4Q9H7M6 989 aa20.41■□□□□ 0.86
DDX39A-212ENST00000590260 XPNPEP1Q9NQW7 623 aa20.41■□□□□ 0.86
DDX39A-212ENST00000590260 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.41■□□□□ 0.86
DDX39A-212ENST00000590260 LPXNO60711 386 aa20.4■□□□□ 0.86
DDX39A-212ENST00000590260 CSDE1O75534 798 aaKnown RBP20.4■□□□□ 0.86
DDX39A-212ENST00000590260 RPS6KA5O75582 802 aa20.4■□□□□ 0.86
DDX39A-212ENST00000590260 GNL2Q13823 731 aaKnown RBP20.4■□□□□ 0.86
DDX39A-212ENST00000590260 CEP170P1Q96L14 293 aa20.4■□□□□ 0.86
DDX39A-212ENST00000590260 MAP7D2Q96T17 732 aa20.4■□□□□ 0.86
DDX39A-212ENST00000590260 BMP2KQ9NSY1 1161 aaPredicted RBP20.4■□□□□ 0.86
DDX39A-212ENST00000590260 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.4■□□□□ 0.86
DDX39A-212ENST00000590260 FOSL2P15408 326 aa20.39■□□□□ 0.85
DDX39A-212ENST00000590260 FGFR4P22455 802 aa20.39■□□□□ 0.85
DDX39A-212ENST00000590260 TMOD1P28289 359 aa20.39■□□□□ 0.85
DDX39A-212ENST00000590260 NFX1Q12986 1120 aaKnown RBP20.39■□□□□ 0.85
DDX39A-212ENST00000590260 PTGDRQ13258 359 aa20.39■□□□□ 0.85
DDX39A-212ENST00000590260 ECM1Q16610 540 aa20.39■□□□□ 0.85
DDX39A-212ENST00000590260 CATSPER3Q86XQ3 398 aa20.39■□□□□ 0.85
DDX39A-212ENST00000590260 ZNF689Q96CS4 500 aaPredicted RBP20.39■□□□□ 0.85
DDX39A-212ENST00000590260 NOL7Q9UMY1 257 aaKnown RBP20.39■□□□□ 0.85
DDX39A-212ENST00000590260 KIF3AQ9Y496 699 aa20.39■□□□□ 0.85
DDX39A-212ENST00000590260 INSL6Q9Y581 213 aa20.39■□□□□ 0.85
DDX39A-212ENST00000590260 DKC1O60832 514 aaKnown RBP eCLIP20.38■□□□□ 0.85
DDX39A-212ENST00000590260 DARSP14868 501 aaKnown RBP20.38■□□□□ 0.85
DDX39A-212ENST00000590260 EIF4BP23588 611 aaKnown RBP20.38■□□□□ 0.85
DDX39A-212ENST00000590260 ERVK-21P61565 698 aa20.38■□□□□ 0.85
DDX39A-212ENST00000590260 LARP1BQ659C4 914 aaKnown RBP20.38■□□□□ 0.85
DDX39A-212ENST00000590260 MCTP1Q6DN14 999 aa20.38■□□□□ 0.85
DDX39A-212ENST00000590260 NEK9Q8TD19 979 aa20.38■□□□□ 0.85
DDX39A-212ENST00000590260 PIGOQ8TEQ8 1089 aa20.38■□□□□ 0.85
DDX39A-212ENST00000590260 ARNTL2Q8WYA1 636 aa20.38■□□□□ 0.85
DDX39A-212ENST00000590260 TMEM143Q96AN5 459 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms