RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 ADAM2Q99965 735 aa13.8□□□□□ -0.2
VAT1-206ENST00000589709 TEKT3Q9BXF9 490 aa13.8□□□□□ -0.2
VAT1-206ENST00000589709 UPF3BQ9BZI7 483 aaKnown RBP13.8□□□□□ -0.2
VAT1-206ENST00000589709 PDRG1Q9NUG6 133 aa13.8□□□□□ -0.2
VAT1-206ENST00000589709 PCDHB7Q9Y5E2 793 aa13.8□□□□□ -0.2
VAT1-206ENST00000589709 DENND3A2RUS2 1198 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 PSMD10O75832 226 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 OATP04181 439 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 COL9A1P20849 921 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 DSC3Q14574 896 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 EFCAB12Q6NXP0 572 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 B3GNT9Q6UX72 402 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 FAM228AQ86W67 206 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 SPPL3Q8TCT6 385 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 MAP7D2Q96T17 732 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 OSMRQ99650 979 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 ADAMTS10Q9H324 1103 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
VAT1-206ENST00000589709 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
VAT1-206ENST00000589709 CD320Q9NPF0 282 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 FAM50BQ9Y247 325 aa13.79□□□□□ -0.2
VAT1-206ENST00000589709 MYH9P35579 1960 aaKnown RBP13.78□□□□□ -0.2
VAT1-206ENST00000589709 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
VAT1-206ENST00000589709 CDKL5O76039 1030 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 VTNP04004 478 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 ITGB1P05556 798 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
VAT1-206ENST00000589709 LTBRP36941 435 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 NLRP11P59045 1033 aaKnown RBP13.78□□□□□ -0.2
VAT1-206ENST00000589709 PRKCEQ02156 737 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 HYAL1Q12794 435 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 TARBP2Q15633 366 aaKnown RBP13.78□□□□□ -0.2
VAT1-206ENST00000589709 TRMT1LQ7Z2T5 733 aaKnown RBP13.78□□□□□ -0.2
VAT1-206ENST00000589709 GJD3Q8N144 294 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 KLHL23Q8NBE8 558 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 LARP6Q9BRS8 491 aaKnown RBP13.78□□□□□ -0.2
VAT1-206ENST00000589709 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
VAT1-206ENST00000589709 UNC45AQ9H3U1 944 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 EPHX3Q9H6B9 360 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 TMEM161AQ9NX61 479 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 CLDND1Q9NY35 253 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 EVPLQ92817 2033 aa13.78□□□□□ -0.2
VAT1-206ENST00000589709 PI4K2BG5E9Z4 385 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 TDP2O95551 362 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 IL9P15248 144 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 GATMP50440 423 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 CLCN3P51790 818 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 ANAPC15P60006 121 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 CDC42EP1Q00587 391 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 STK3Q13188 491 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 NONOQ15233 471 aaKnown RBP eCLIP13.77□□□□□ -0.21
VAT1-206ENST00000589709 UGCGQ16739 394 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 PAN2Q504Q3 1202 aaKnown RBP13.77□□□□□ -0.21
VAT1-206ENST00000589709 XKR3Q5GH77 459 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 MIER3Q7Z3K6 550 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 KRT25Q7Z3Z0 450 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 ETNPPLQ8TBG4 499 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 PPP2R3CQ969Q6 453 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 AIFM3Q96NN9 605 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 ATP6V0A4Q9HBG4 840 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 AAASQ9NRG9 546 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 PRKAG3Q9UGI9 489 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 AKT3Q9Y243 479 aa13.77□□□□□ -0.21
VAT1-206ENST00000589709 STK36Q9NRP7 1315 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 CHMP2AO43633 222 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 PFKFB2O60825 505 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 STBD1O95210 358 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 DNAJB1P25685 340 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 GPC3P51654 580 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 UBE3AQ05086 875 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 TBC1D8BQ0IIM8 1120 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 SCRN1Q12765 414 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 ADAM15Q13444 863 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 CSPP1Q1MSJ5 1256 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 FAM102BQ5T8I3 360 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 LRRC71Q8N4P6 559 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 GJA10Q969M2 543 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 PPP1R16BQ96T49 567 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 PHF20Q9BVI0 1012 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 SLKQ9H2G2 1235 aaPredicted RBP13.76□□□□□ -0.21
VAT1-206ENST00000589709 PCDHB12Q9Y5F1 795 aa13.76□□□□□ -0.21
VAT1-206ENST00000589709 IGKV6-21A0A0C4DH24 114 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 TBKBP1A7MCY6 615 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 HOXA2O43364 376 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 GPR37L1O60883 481 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 DARSP14868 501 aaKnown RBP13.75□□□□□ -0.21
VAT1-206ENST00000589709 ZSCAN20P17040 1043 aaPredicted RBP13.75□□□□□ -0.21
VAT1-206ENST00000589709 XBP1P17861 261 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 INF2Q27J81 1249 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 PPP4R3AQ6IN85 833 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 EP400NLQ6ZTU2 488 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 POF1BQ8WVV4 589 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.214e-6■■■■□ 20.7
VAT1-206ENST00000589709 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 CEP89Q96ST8 783 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 TMEM117Q9H0C3 514 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 PPP4R2Q9NY27 417 aa13.75□□□□□ -0.21
VAT1-206ENST00000589709 DDX25Q9UHL0 483 aaKnown RBP13.75□□□□□ -0.21
VAT1-206ENST00000589709 KCNJ14Q9UNX9 436 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms