RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 ZC2HC1CQ53FD0 456 aaPredicted RBP19.22■□□□□ 0.67
ERCC2-211ENST00000588652 SPATA4Q8NEY3 305 aa19.22■□□□□ 0.67
ERCC2-211ENST00000588652 AENQ8WTP8 325 aaKnown RBP19.22■□□□□ 0.67
ERCC2-211ENST00000588652 METTL14Q9HCE5 456 aaKnown RBP19.22■□□□□ 0.67
ERCC2-211ENST00000588652 SEL1LQ9UBV2 794 aa19.22■□□□□ 0.67
ERCC2-211ENST00000588652 PPP1R1BQ9UD71 204 aaPredicted RBP19.22■□□□□ 0.67
ERCC2-211ENST00000588652 HACL1Q9UJ83 578 aa19.22■□□□□ 0.67
ERCC2-211ENST00000588652 ODF2LQ9ULJ1 636 aa19.22■□□□□ 0.67
ERCC2-211ENST00000588652 UTRNP46939 3433 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 NCK2O43639 380 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 CAPN2P17655 700 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 VCAM1P19320 739 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 MTMR2Q13614 643 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 TBC1D10BQ4KMP7 808 aaPredicted RBP19.21■□□□□ 0.67
ERCC2-211ENST00000588652 DPY19L2P1Q6NXN4 242 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 NIPA1Q7RTP0 329 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 NEK9Q8TD19 979 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 FAM204AQ9H8W3 233 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 LUC7LQ9NQ29 371 aaKnown RBP19.21■□□□□ 0.67
ERCC2-211ENST00000588652 HOMER2Q9NSB8 354 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 PPP1R9AQ9ULJ8 1098 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 A0A0U1RQG5 324 aaPredicted RBP19.21■□□□□ 0.67
ERCC2-211ENST00000588652 DHX15O43143 795 aaKnown RBP19.21■□□□□ 0.67
ERCC2-211ENST00000588652 EPB41P11171 864 aaKnown RBP19.21■□□□□ 0.67
ERCC2-211ENST00000588652 MRPS9P82933 396 aaKnown RBP19.21■□□□□ 0.67
ERCC2-211ENST00000588652 PCNX4Q63HM2 1172 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 ZNF720Q7Z2F6 126 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 SYTL5Q8TDW5 730 aaPredicted RBP19.21■□□□□ 0.67
ERCC2-211ENST00000588652 HDAC7Q8WUI4 952 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 RUBCNQ92622 972 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 PSMB7Q99436 277 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 LRRC1Q9BTT6 524 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 TLR10Q9BXR5 811 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 IKZF4Q9H2S9 585 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 PLCB1Q9NQ66 1216 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 SMARCAL1Q9NZC9 954 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 AIPL1Q9NZN9 384 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 PKD2L1Q9P0L9 805 aa19.21■□□□□ 0.67
ERCC2-211ENST00000588652 SLC9A1P19634 815 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 CXCR5P32302 372 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 RAPGEF1Q13905 1077 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 TKFCQ3LXA3 575 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 DCAF17Q5H9S7 520 aaPredicted RBP19.2■□□□□ 0.66
ERCC2-211ENST00000588652 KLHDC7AQ5VTJ3 777 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 FAM178BQ8IXR5 827 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 RNF10Q8N5U6 811 aaKnown RBP19.2■□□□□ 0.66
ERCC2-211ENST00000588652 SLC35C1Q96A29 364 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 NOX5Q96PH1 765 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 EHD2Q9NZN4 543 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 CNOT7Q9UIV1 285 aaKnown RBP19.2■□□□□ 0.66
ERCC2-211ENST00000588652 UBIAD1Q9Y5Z9 338 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 BUB1O43683 1085 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 ACTN1P12814 892 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 GUCY2CP25092 1073 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 NFIL3Q16649 462 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 EXOC3L4Q17RC7 722 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 NBPF12Q5TAG4 269 aaPredicted RBP19.2■□□□□ 0.66
ERCC2-211ENST00000588652 CCDC181Q5TID7 509 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 MIER3Q7Z3K6 550 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 MTFR1LQ9H019 292 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 MAP3K20Q9NYL2 800 aaKnown RBP19.2■□□□□ 0.66
ERCC2-211ENST00000588652 DMGDHQ9UI17 866 aaKnown RBP19.2■□□□□ 0.66
ERCC2-211ENST00000588652 BCS1LQ9Y276 419 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 PCDHB13Q9Y5F0 798 aa19.2■□□□□ 0.66
ERCC2-211ENST00000588652 PON1P27169 355 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 NAP1L1P55209 391 aaKnown RBP19.19■□□□□ 0.66
ERCC2-211ENST00000588652 RPS6P62753 249 aaKnown RBP19.19■□□□□ 0.66
ERCC2-211ENST00000588652 ITGB3BPQ13352 177 aaPredicted RBP19.19■□□□□ 0.66
ERCC2-211ENST00000588652 ODR4Q5SWX8 454 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 TCERG1LQ5VWI1 586 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 FAM133AQ8N9E0 248 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 BORCS6Q96GS4 357 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 RPAP3Q9H6T3 665 aaPredicted RBP19.19■□□□□ 0.66
ERCC2-211ENST00000588652 GJA3Q9Y6H8 435 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 PARP14Q460N5 1801 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 DOCK1Q14185 1865 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 ARHGEF35A5YM69 484 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 TULP2O00295 520 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 UCHL3P15374 230 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 PAFAH1B1P43034 410 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 LEKR1Q6ZMV7 388 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 KSR1Q8IVT5 923 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 GOLGA6L1Q8N7Z2 621 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 TAAR1Q96RJ0 339 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 HINFPQ9BQA5 517 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 AGO4Q9HCK5 861 aaKnown RBP19.19■□□□□ 0.66
ERCC2-211ENST00000588652 UBE4BO95155 1302 aa19.19■□□□□ 0.66
ERCC2-211ENST00000588652 AGPSO00116 658 aa19.18■□□□□ 0.66
ERCC2-211ENST00000588652 RPS6KA5O75582 802 aa19.18■□□□□ 0.66
ERCC2-211ENST00000588652 P4HBP07237 508 aaKnown RBP19.18■□□□□ 0.66
ERCC2-211ENST00000588652 GGCXP38435 758 aa19.18■□□□□ 0.66
ERCC2-211ENST00000588652 MAPK7Q13164 816 aa19.18■□□□□ 0.66
ERCC2-211ENST00000588652 SAMD3Q8N6K7 520 aa19.18■□□□□ 0.66
ERCC2-211ENST00000588652 RIN2Q8WYP3 895 aaPredicted RBP19.18■□□□□ 0.66
ERCC2-211ENST00000588652 FZD9O00144 591 aa19.17■□□□□ 0.66
ERCC2-211ENST00000588652 MATR3P43243 847 aaKnown RBP eCLIP19.17■□□□□ 0.66
ERCC2-211ENST00000588652 ARID5AQ03989 594 aa19.17■□□□□ 0.66
ERCC2-211ENST00000588652 KLHL30Q0D2K2 578 aa19.17■□□□□ 0.66
ERCC2-211ENST00000588652 SPP2Q13103 211 aa19.17■□□□□ 0.66
ERCC2-211ENST00000588652 MTMR1Q13613 665 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms