RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SLC9A2Q9UBY0 812 aa9.78□□□□□ -0.84
SDF2-204ENST00000587338 SEC63Q9UGP8 760 aaKnown RBP9.78□□□□□ -0.84
SDF2-204ENST00000587338 ST3GAL5Q9UNP4 418 aa9.78□□□□□ -0.84
SDF2-204ENST00000587338 UBIAD1Q9Y5Z9 338 aa9.78□□□□□ -0.84
SDF2-204ENST00000587338 OTOGLQ3ZCN5 2332 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 C2orf71A6NGG8 1288 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 GPR182O15218 404 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 PI15O43692 258 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 CLASP2O75122 1294 aaKnown RBP9.77□□□□□ -0.85
SDF2-204ENST00000587338 ARP10275 920 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 AOC1P19801 751 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 KLRC1P26715 233 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 STAT5BP51692 787 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 ACTR2P61160 394 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 TROAPQ12815 778 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 SART3Q15020 963 aaKnown RBP9.77□□□□□ -0.85
SDF2-204ENST00000587338 UBE2SQ16763 222 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 KANK3Q6NY19 840 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 LRRC55Q6ZSA7 311 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 CATIPQ7Z7H3 387 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 CCDC105Q8IYK2 499 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 KIAA2013Q8IYS2 634 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 ZDHHC14Q8IZN3 488 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 LRRC43Q8N309 656 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 TMEM87AQ8NBN3 555 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 RNF169Q8NCN4 708 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 OSMRQ99650 979 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 HINFPQ9BQA5 517 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 SDF4Q9BRK5 362 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 TMEM117Q9H0C3 514 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 PSTPIP2Q9H939 334 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 JADE2Q9NQC1 790 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 SPG21Q9NZD8 308 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 FBXL21Q9UKT6 434 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 KMT2BQ9UMN6 2715 aaPredicted RBP9.77□□□□□ -0.85
SDF2-204ENST00000587338 GPR179Q6PRD1 2367 aa9.77□□□□□ -0.85
SDF2-204ENST00000587338 SPDYE3A6NKU9 549 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 HIP1O00291 1037 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 HOXA2O43364 376 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 LMNAP02545 664 aaKnown RBP9.76□□□□□ -0.85
SDF2-204ENST00000587338 KIZQ2M2Z5 673 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 ATAT1Q5SQI0 421 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 KIAA1841Q6NSI8 718 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 FAM43BQ6ZT52 329 aaPredicted RBP9.76□□□□□ -0.85
SDF2-204ENST00000587338 PLPPR4Q7Z2D5 763 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 KIAA0319LQ8IZA0 1049 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 SIX5Q8N196 739 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 PLCD3Q8N3E9 789 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 MRPL43Q8N983 215 aaKnown RBP9.76□□□□□ -0.85
SDF2-204ENST00000587338 DTWD2Q8NBA8 298 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 CTCFLQ8NI51 663 aaPredicted RBP9.76□□□□□ -0.85
SDF2-204ENST00000587338 CASD1Q96PB1 797 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 SPZ1Q9BXG8 430 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 ELAC1Q9H777 363 aaKnown RBP9.76□□□□□ -0.85
SDF2-204ENST00000587338 CYP26B1Q9NR63 512 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 DZANK1Q9NVP4 752 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 CHD8Q9HCK8 2581 aa9.76□□□□□ -0.85
SDF2-204ENST00000587338 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.75□□□□□ -0.85
SDF2-204ENST00000587338 SPDYE4A6NLX3 237 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 STK25O00506 426 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 BACH1O14867 736 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 EOMESO95936 686 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 NPR3P17342 541 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 RFX1P22670 979 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 FAM189BP81408 668 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 TMC5Q6UXY8 1006 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 RALYLQ86SE5 291 aaKnown RBP9.75□□□□□ -0.85
SDF2-204ENST00000587338 SLC39A11Q8N1S5 342 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 ACSF2Q96CM8 615 aaPredicted RBP9.75□□□□□ -0.85
SDF2-204ENST00000587338 RTP3Q9BQQ7 232 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 MYL10Q9BUA6 226 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 KCNH7Q9NS40 1196 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 RNF19AQ9NV58 838 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 USTQ9Y2C2 406 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 R4GN57 208 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 CHD6Q8TD26 2715 aa9.75□□□□□ -0.85
SDF2-204ENST00000587338 NT5C1B-RDH14C9J2C7 533 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 DDX39AO00148 427 aaKnown RBP9.74□□□□□ -0.85
SDF2-204ENST00000587338 MAFGO15525 162 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 HBP1O60381 514 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 KRT37O76014 449 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 PLEKHA8P1O95397 391 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 CXCL14O95715 111 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 VTNP04004 478 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 EPCAMP16422 314 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 KIF5BP33176 963 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 SLC26A2P50443 739 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 METAP2P50579 478 aaKnown RBP eCLIP9.74□□□□□ -0.85
SDF2-204ENST00000587338 CRYBB1P53674 252 aaPredicted RBP9.74□□□□□ -0.85
SDF2-204ENST00000587338 ITGB3BPQ13352 177 aaPredicted RBP9.74□□□□□ -0.85
SDF2-204ENST00000587338 TDGQ13569 410 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 DSC3Q14574 896 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 BMS1Q14692 1282 aaKnown RBP9.74□□□□□ -0.85
SDF2-204ENST00000587338 CLLU1OSQ5K130 101 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 CCDC149Q6ZUS6 474 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 CABP7Q86V35 215 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 PLEKHM2Q8IWE5 1019 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 CYP2W1Q8TAV3 490 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 FEZF2Q8TBJ5 459 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms