RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 COL1A2P08123 1366 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 CCDC196A0A1B0GTZ2 297 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 EYA4O95677 639 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 PSAPP07602 524 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 HMGB1P09429 215 aaKnown RBP22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 NLRP11P59045 1033 aaKnown RBP22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 FAM189BP81408 668 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 ODR4Q5SWX8 454 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 ZNF746Q6NUN9 644 aaPredicted RBP22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 EFCAB12Q6NXP0 572 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 COLGALT1Q8NBJ5 622 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 AAASQ9NRG9 546 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 AKT3Q9Y243 479 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 PCDHA10Q9Y5I2 948 aa22.79■■□□□ 1.24
CLPTM1-204ENST00000585961 LOXHD1Q8IVV2 1947 aa22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 PRPF3O43395 683 aaKnown RBP22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 CDC45O75419 566 aa22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 REXO1Q8N1G1 1221 aaKnown RBP22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 LRRC71Q8N4P6 559 aa22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 GJA10Q969M2 543 aa22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 RPGRIP1Q96KN7 1286 aa22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 FBXL18Q96ME1 805 aa22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 CWH43Q9H720 699 aa22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 USP15Q9Y4E8 981 aaPredicted RBP22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 TRIOO75962 3097 aa22.78■■□□□ 1.24
CLPTM1-204ENST00000585961 ATG2AQ2TAZ0 1938 aa22.77■■□□□ 1.24
CLPTM1-204ENST00000585961 AKAP17AQ02040 695 aaKnown RBP22.77■■□□□ 1.24
CLPTM1-204ENST00000585961 DSC3Q14574 896 aa22.77■■□□□ 1.24
CLPTM1-204ENST00000585961 HERC4Q5GLZ8 1057 aaPredicted RBP22.77■■□□□ 1.24
CLPTM1-204ENST00000585961 LRRC55Q6ZSA7 311 aa22.77■■□□□ 1.24
CLPTM1-204ENST00000585961 SMRP1Q8NCR6 262 aa22.77■■□□□ 1.24
CLPTM1-204ENST00000585961 VN1R2Q8NFZ6 395 aa22.77■■□□□ 1.24
CLPTM1-204ENST00000585961 APOL5Q9BWW9 433 aa22.77■■□□□ 1.24
CLPTM1-204ENST00000585961 TLR9Q9NR96 1032 aa22.77■■□□□ 1.24
CLPTM1-204ENST00000585961 EVPLQ92817 2033 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 MUC6Q6W4X9 2439 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 EDIL3O43854 480 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 FGFR4P22455 802 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 CCT2P78371 535 aaKnown RBP22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 COASYQ13057 564 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 PLPP4Q5VZY2 271 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 CENPQQ7L2Z9 268 aaPredicted RBP22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 RNF169Q8NCN4 708 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 EDAQ92838 391 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 CASD1Q96PB1 797 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 SLC26A6Q9BXS9 759 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 ADAMTS10Q9H324 1103 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 TMEM161AQ9NX61 479 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 SNX14Q9Y5W7 946 aa22.76■■□□□ 1.23
CLPTM1-204ENST00000585961 ESYT2A0FGR8 921 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 CHMP2AO43633 222 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 ZNF862O60290 1169 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 CSDE1O75534 798 aaKnown RBP22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 GNA11P29992 359 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 PBX3P40426 434 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 RCAN1P53805 252 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 LLGL2Q6P1M3 1020 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 BLOC1S2Q6QNY1 142 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 SMAP1Q8IYB5 467 aaPredicted RBP22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 CCDC12Q8WUD4 166 aaPredicted RBP22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 MFSD14AQ96MC6 490 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 DISC1Q9NRI5 854 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 NRBP2Q9NSY0 501 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 RNF216Q9NWF9 866 aaPredicted RBP22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 VPS54Q9P1Q0 977 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 WDFY4Q6ZS81 3184 aa22.75■■□□□ 1.23
CLPTM1-204ENST00000585961 MAGEB2O15479 319 aa22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 ZSCAN20P17040 1043 aaPredicted RBP22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 CIITAP33076 1130 aa22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 SETQ01105 290 aaPredicted RBP22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 UBE3AQ05086 875 aa22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 DUSP6Q16828 381 aa22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 MCTP2Q6DN12 878 aa22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 CCDC136Q96JN2 1154 aa22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 NCOA5Q9HCD5 579 aaKnown RBP22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 RNF19AQ9NV58 838 aa22.74■■□□□ 1.23
CLPTM1-204ENST00000585961 LOC730098B7Z3J9 87 aa22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 MSH4O15457 936 aa22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 TMOD1P28289 359 aa22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 UGCGQ16739 394 aa22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 KCNB2Q92953 911 aa22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 LENG9Q96B70 501 aa22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 LARP6Q9BRS8 491 aaKnown RBP22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 ELAC1Q9H777 363 aaKnown RBP22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 PUF60Q9UHX1 559 aaKnown RBP22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 CEP131Q9UPN4 1083 aa22.73■■□□□ 1.23
CLPTM1-204ENST00000585961 WDR64B1ANS9 1081 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 FSCN2O14926 492 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 RPS6KB1P23443 525 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 EIF4BP23588 611 aaKnown RBP22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 TECP42680 631 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 NLRP5P59047 1200 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 NHLH1Q02575 133 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 NTRK3Q16288 839 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 KCNT2Q6UVM3 1135 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 ECHDC2Q86YB7 292 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 BICD2Q8TD16 824 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 MRPS27Q92552 414 aaKnown RBP22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 PBXIP1Q96AQ6 731 aa22.72■■□□□ 1.23
CLPTM1-204ENST00000585961 SCLT1Q96NL6 688 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms