RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 PLEKHH3Q7Z736 793 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 FAM35AQ86V20 835 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 NCAPG2Q86XI2 1143 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 WFDC8Q8IUA0 241 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 ABRAQ8N0Z2 381 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 CHST13Q8NET6 341 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 NPLOC4Q8TAT6 608 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 PHKBQ93100 1093 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 COA7Q96BR5 231 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 UPF2Q9HAU5 1272 aaKnown RBP6.5□□□□□ -1.37
CDH8-213ENST00000584966 A1CFQ9NQ94 594 aaKnown RBP6.5□□□□□ -1.37
CDH8-213ENST00000584966 RNF146Q9NTX7 359 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 FLRT1Q9NZU1 646 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 COL20A1Q9P218 1284 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 CCPG1Q9ULG6 757 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 ISY1Q9ULR0 285 aaKnown RBP6.5□□□□□ -1.37
CDH8-213ENST00000584966 LIMCH1Q9UPQ0 1083 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 HCN4Q9Y3Q4 1203 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 TCHHQ07283 1943 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 MYH15Q9Y2K3 1946 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 CCDC196A0A1B0GTZ2 297 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 STXBP3O00186 592 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 TNPO2O14787 897 aaKnown RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 ZBTB39O15060 712 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 PGK2P07205 417 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 XRCC5P13010 732 aaKnown RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 ALAS1P13196 640 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 CPB1P15086 417 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 ADORA2AP29274 412 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 COPB2P35606 906 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 CNTN2Q02246 1040 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 PLAURQ03405 335 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 CCL14Q16627 93 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 PFKFB3Q16875 520 aaPredicted RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 USH1GQ495M9 461 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 COL13A1Q5TAT6 717 aaPredicted RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 WWC2Q6AWC2 1192 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 NOL8Q76FK4 1167 aaKnown RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 CTU1Q7Z7A3 348 aaKnown RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 HOMER1Q86YM7 354 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 FAM133AQ8N9E0 248 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 NSUN7Q8NE18 718 aaKnown RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 SMARCC2Q8TAQ2 1214 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 PIBF1Q8WXW3 757 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 RRP36Q96EU6 259 aaKnown RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 SUSD3Q96L08 255 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 DMRTB1Q96MA1 342 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 MMP19Q99542 508 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 AMNQ9BXJ7 453 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 RNF26Q9BY78 433 aaPredicted RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 MAF1Q9H063 256 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 SLKQ9H2G2 1235 aaPredicted RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 ACAD9Q9H845 621 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 HOMER2Q9NSB8 354 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 CYP39A1Q9NYL5 469 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 NAP1L2Q9ULW6 460 aaPredicted RBP6.49□□□□□ -1.37
CDH8-213ENST00000584966 TRIM17Q9Y577 477 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 PCDHA1Q9Y5I3 950 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 ABCB11O95342 1321 aa6.49□□□□□ -1.37
CDH8-213ENST00000584966 MEIS2O14770 477 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 EDIL3O43854 480 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 JAK2O60674 1132 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 DEAF1O75398 565 aaPredicted RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 IGLV1-40P01703 118 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 FCER1AP12319 257 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 CYP2B6P20813 491 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 BRD2P25440 801 aaKnown RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 HSD17B4P51659 736 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 PRMT2P55345 433 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 RPS6P62753 249 aaKnown RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 CUL4AQ13619 759 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 BAATQ14032 418 aaPredicted RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 MRPL58Q14197 206 aaKnown RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 KIF22Q14807 665 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 NPY5RQ15761 445 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 MAMDC4Q6UXC1 1216 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 SYTL5Q8TDW5 730 aaPredicted RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 TRIB2Q92519 343 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 SNX21Q969T3 373 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 ALKBH8Q96BT7 664 aaKnown RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 TMX3Q96JJ7 454 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 MAML3Q96JK9 1138 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 ZSCAN31Q96LW9 406 aaPredicted RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 AIFM3Q96NN9 605 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 PNMA5Q96PV4 448 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 SLC26A6Q9BXS9 759 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 PHACTR1Q9C0D0 580 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 KATNBL1Q9H079 304 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 BARHL2Q9NY43 387 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 FBXO40Q9UH90 709 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 PNMA2Q9UL42 364 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 DIS3Q9Y2L1 958 aaKnown RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 MRPL11Q9Y3B7 192 aaKnown RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 PTCH2Q9Y6C5 1203 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 DDX49Q9Y6V7 483 aaKnown RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 STK36Q9NRP7 1315 aa6.48□□□□□ -1.37
CDH8-213ENST00000584966 MYH9P35579 1960 aaKnown RBP6.48□□□□□ -1.37
CDH8-213ENST00000584966 ALPK3Q96L96 1907 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 GPR182O15218 404 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 DHX16O60231 1041 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms