RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 ADGRA3Q8IWK6 1321 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 COL4A4P53420 1690 aaPredicted RBP18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 TTC3P53804 2025 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 TRANK1O15050 2925 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 EML1O00423 815 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 MAFO75444 373 aaPredicted RBP18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 DNM2P50570 870 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 CALCRLQ16602 461 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 ZNF410Q86VK4 478 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 METTL13Q8N6R0 699 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 ZNF689Q96CS4 500 aaPredicted RBP18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 MTMR9Q96QG7 549 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 PCDHA12Q9UN75 941 aa18.8■□□□□ 0.6
CSNK1D-225ENST00000584913 FAM205CA6NFA0 338 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 RFC5P40937 340 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 TMEM62Q0P6H9 643 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 ANO5Q75V66 913 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 OTUD6AQ7L8S5 288 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 TMCO2Q7Z6W1 182 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 NOSTRINQ8IVI9 506 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 LINC01599Q8WXQ3 324 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 ARNTL2Q8WYA1 636 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 RSPH1Q8WYR4 309 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 LXNQ9BS40 222 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 ADAMTS10Q9H324 1103 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 ZSWIM4Q9H7M6 989 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 RGS18Q9NS28 235 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 AKT3Q9Y243 479 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 MTCH2Q9Y6C9 303 aa18.79■□□□□ 0.6
CSNK1D-225ENST00000584913 C5orf67F2Z3F1 127 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 DGKIO75912 1065 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 RB1P06400 928 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 EIF4BP23588 611 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 U2AF2P26368 475 aaKnown RBP eCLIP18.78■□□□□ 0.69e-13■■■■■ 29.8
CSNK1D-225ENST00000584913 SARSP49591 514 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 GPC3P51654 580 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 CLCN3P51790 818 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 KIZQ2M2Z5 673 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 CMTR2Q8IYT2 770 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 BANK1Q8NDB2 785 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 TMEM40Q8WWA1 233 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 SLC7A3Q8WY07 619 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 CLP1Q92989 425 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 CYP26B1Q9NR63 512 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 ST3GAL5Q9UNP4 418 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 NOC2LQ9Y3T9 749 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 EVPLQ92817 2033 aa18.78■□□□□ 0.6
CSNK1D-225ENST00000584913 LPXNO60711 386 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 VTNP04004 478 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 IGFBP4P22692 258 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 NLRP11P59045 1033 aaKnown RBP18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 GRB10Q13322 594 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 MTERF2Q49AM1 385 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 SLC24A5Q71RS6 500 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 FAM228AQ86W67 206 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 FIBCD1Q8N539 461 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 OSMRQ99650 979 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 HSD17B14Q9BPX1 270 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 INO80BQ9C086 356 aaPredicted RBP18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 TMX1Q9H3N1 280 aa18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 DHX33Q9H6R0 707 aaKnown RBP18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 TTC12Q9H892 705 aaPredicted RBP18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 NOL7Q9UMY1 257 aaKnown RBP18.77■□□□□ 0.6
CSNK1D-225ENST00000584913 LOXHD1Q8IVV2 1947 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 EPOPA6NHQ4 379 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 DTNBO60941 627 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 XRCC6P12956 609 aaKnown RBP eCLIP18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 DARSP14868 501 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 MUTP22033 750 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 YWHABP31946 246 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 NCAPH2Q6IBW4 605 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 FAM117BQ6P1L5 589 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 RTN4RL1Q86UN2 441 aaPredicted RBP18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 LRRC71Q8N4P6 559 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 FBXO22Q8NEZ5 403 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 ATXN2LQ8WWM7 1075 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 TMX3Q96JJ7 454 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 TRAIPQ9BWF2 469 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 PLVAPQ9BX97 442 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 SUGCTQ9HAC7 445 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 CDHR5Q9HBB8 845 aa18.76■□□□□ 0.59
CSNK1D-225ENST00000584913 EYSQ5T1H1 3165 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 DENND3A2RUS2 1198 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 DDX11L8A8MPP1 907 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 C9IYK1 514 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 H3BNC9 293 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 UPP2O95045 317 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 FAM189BP81408 668 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 NFX1Q12986 1120 aaKnown RBP18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 GNL2Q13823 731 aaKnown RBP18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 DSC3Q14574 896 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 PCBP1Q15365 356 aaKnown RBP eCLIP18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 NAALADL2Q58DX5 795 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 TCP11Q8WWU5 503 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 EIF2AK1Q9BQI3 630 aaKnown RBP18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 CHST12Q9NRB3 414 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 ANKEF1Q9NU02 776 aa18.75■□□□□ 0.59
CSNK1D-225ENST00000584913 THEGQ9P2T0 379 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms