RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 BDH2Q9BUT1 245 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 POLR3AO14802 1390 aaPredicted RBP2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 ARFGEF2Q9Y6D5 1785 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 ARID1BQ8NFD5 2236 aaPredicted RBP2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 NSD3Q9BZ95 1437 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 RFPL3O75679 317 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 PMLP29590 882 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 PLA2G5P39877 138 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 BIRC2Q13490 618 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 SLC4A10Q6U841 1118 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 EEPD1Q7L9B9 569 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 SLCO6A1Q86UG4 719 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 FIBCD1Q8N539 461 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 DVL3Q92997 716 aaPredicted RBP2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 VWCEQ96DN2 955 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 FAM86C1Q9NVL1 165 aa2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 MAGEC2Q9UBF1 373 aaPredicted RBP2.4□□□□□ -2.02
SMCHD1-211ENST00000584897 C2orf71A6NGG8 1288 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 IRS4O14654 1257 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 PSPNO60542 156 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 FLT3P36888 993 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 CDR1P51861 262 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 NEK4P51957 841 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 TGFB2P61812 414 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 TMF1P82094 1093 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 PTPN11Q06124 597 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 KRT72Q14CN4 511 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 HDGFL2Q7Z4V5 671 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 CIR1Q86X95 450 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 FAM129CQ86XR2 697 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 FAM126BQ8IXS8 530 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 EXOC8Q8IYI6 725 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 NLGN4XQ8N0W4 816 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 LRRC47Q8N1G4 583 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 THAP3Q8WTV1 239 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 DIO2Q92813 273 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 EPB41L1Q9H4G0 881 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 KLHL14Q9P2G3 628 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 CORINQ9Y5Q5 1042 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 UBR3Q6ZT12 1888 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 ANKRD26Q9UPS8 1709 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 METP08581 1390 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 MROH6A6NGR9 719 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 CD247P20963 164 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 TRHRP34981 398 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 SLURP1P55000 103 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 PLEKHG4Q58EX7 1191 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 ZMAT1Q5H9K5 638 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 NT5DC1Q5TFE4 455 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 RALYLQ86SE5 291 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 C1QL4Q86Z23 238 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 SNRNP27Q8WVK2 155 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 KCNC2Q96PR1 638 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 ZFYVE21Q9BQ24 234 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 FAM126AQ9BYI3 521 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 SEC61A2Q9H9S3 476 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 DDX56Q9NY93 547 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 SYNPO2Q9UMS6 1093 aa2.4□□□□□ -2.03
SMCHD1-211ENST00000584897 CENPJQ9HC77 1338 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 TRPM7Q96QT4 1865 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 CCDC7Q96M83 1385 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 SH3D21A4FU49 640 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 FAM221BA6H8Z2 402 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 MEIS1O00470 390 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 AURKAO14965 403 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 FGF10O15520 208 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 MAGEA10P43363 369 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 KCNJ6P48051 423 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 DDR2Q16832 855 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 LCE1DQ5T752 114 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 VHLLQ6RSH7 139 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 RSPO2Q6UXX9 243 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 RIOX2Q8IUF8 465 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 CARFQ8N187 725 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 KLHL36Q8N4N3 616 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 LEO1Q8WVC0 666 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 KCTD13Q8WZ19 329 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 USP7Q93009 1102 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 LPPQ93052 612 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 MTMR8Q96EF0 704 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 CCDC113Q9H0I3 377 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 PGAP2Q9UHJ9 254 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 CLCA2Q9UQC9 943 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 EDC4Q6P2E9 1401 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 MON2Q7Z3U7 1717 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 ALG1L2C9J202 215 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 DNAJA2O60884 412 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 DBHP09172 617 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 ACRP10323 421 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 MVKQ03426 396 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 LSAMPQ13449 338 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 TESK1Q15569 626 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 ZRSR2Q15696 482 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 DDB1Q16531 1140 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 REXO1L1PQ8IX06 675 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 FAM178BQ8IXR5 827 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 LILRB2Q8N423 598 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 UBR7Q8N806 425 aa2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 DDX17Q92841 729 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-211ENST00000584897 ALG1Q9BT22 464 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms