RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■■■□□ 15.1
CDK5RAP3-231ENST00000584063 SLC30A10Q6XR72 485 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CCNI2Q6ZMN8 369 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TSEN2Q8NCE0 465 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NAV1Q8NEY1 1877 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ARL8AQ96BM9 186 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 SPZ1Q9BXG8 430 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 C6orf50Q9HD87 102 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ZNRF3Q9ULT6 936 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 ADAMTSL1Q8N6G6 1762 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PRPF6O94906 941 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 GH2P01242 217 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 WDR93Q6P2C0 686 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 OTUD6AQ7L8S5 288 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 NELFCDQ8IXH7 590 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 FLCNQ8NFG4 579 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 CCDC26Q8TAB7 109 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 RGPD3A6NKT7 1758 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 RGPD4Q7Z3J3 1758 aa12.65□□□□□ -0.38
CDK5RAP3-231ENST00000584063 TLDC2A0PJX2 215 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ZEB2O60315 1214 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FTCDO95954 541 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 KRT14P02533 472 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 EEF1GP26641 437 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SLC1A4P43007 532 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 KIF11P52732 1056 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 KCNB1Q14721 858 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CALCRLQ16602 461 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SYCP2LQ5T4T6 812 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PAPD7Q5XG87 772 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 KRT25Q7Z3Z0 450 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CREG2Q8IUH2 290 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 HELQQ8TDG4 1101 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SLC39A3Q9BRY0 314 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TTYH3Q9C0H2 523 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FAM107BQ9H098 131 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CENPHQ9H3R5 247 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MYO1AQ9UBC5 1043 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MAFFQ9ULX9 164 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PCDHA13Q9Y5I0 950 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L10C9JJH3 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 F8VZ95 297 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CCNE1P24864 410 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SFMBT2Q5VUG0 894 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 THAP9Q9H5L6 903 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ODF2LQ9ULJ1 636 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L15C9J2P7 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L13C9JLJ4 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L11C9JVI0 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L18D6R9N7 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L22D6RA61 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L17D6RBQ6 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L19D6RCP7 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L20D6RJB6 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 EGFRP00533 1210 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 IMPDH2P12268 514 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 HOXD10P28358 340 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ICA1Q05084 483 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L24Q0WX57 530 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ABCB5Q2M3G0 1257 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USP17L6PQ6QN14 398 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 NLGN2Q8NFZ4 835 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MTMR8Q96EF0 704 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■□□□□ 8
CDK5RAP3-231ENST00000584063 ACBD3Q9H3P7 528 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 JMJD4Q9H9V9 463 aa12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RBM12Q9NTZ6 932 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RNASEH2AO75792 299 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FAM153BP0C7A2 387 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 IBSPP21815 317 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 STAT3P40763 770 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FAM153CQ494X1 144 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ADGRF4Q8IZF3 695 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PAF1Q8N7H5 531 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SNX29Q8TEQ0 813 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 HOXC10Q9NYD6 342 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FAM153AQ9UHL3 310 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 LTBP1Q14766 1721 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 IVLP07476 585 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PIK3CAP42336 1068 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 JAG1P78504 1218 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PDCLQ13371 301 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CACNA2D4Q7Z3S7 1137 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SPATA4Q8NEY3 305 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FAM76AQ8TAV0 307 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MTMR9Q96QG7 549 aa12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 NAP1L4Q99733 375 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MYH1P12882 1939 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 LRRC37AA6NMS7 1700 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 LINC00854A0A1B0GVQ3 168 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MAGEA1P43355 309 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms