RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 SLU7O95391 586 aaKnown RBP11.06□□□□□ -0.64
MKS1-212ENST00000583577 SELPP16109 830 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 SMARCA1P28370 1054 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 CPT1AP50416 773 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 METAP2P50579 478 aaKnown RBP eCLIP11.06□□□□□ -0.64
MKS1-212ENST00000583577 NCBP1Q09161 790 aaKnown RBP11.06□□□□□ -0.64
MKS1-212ENST00000583577 TRAF1Q13077 416 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 COL9A2Q14055 689 aaPredicted RBP11.06□□□□□ -0.64
MKS1-212ENST00000583577 PTGISQ16647 500 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 QRICH1Q2TAL8 776 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 USH1GQ495M9 461 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 MCTP2Q6DN12 878 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 NFRKBQ6P4R8 1299 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.06□□□□□ -0.64
MKS1-212ENST00000583577 LRRC8DQ7L1W4 858 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 FBXO11Q86XK2 927 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 TMEM192Q8IY95 271 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 MYOCDQ8IZQ8 938 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 FAM133AQ8N9E0 248 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 C16orf45Q96MC5 204 aaPredicted RBP11.06□□□□□ -0.64
MKS1-212ENST00000583577 SPZ1Q9BXG8 430 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 RIOX1Q9H6W3 641 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 L2HGDHQ9H9P8 463 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 CEP131Q9UPN4 1083 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 HPSEQ9Y251 543 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 PHLPP2Q6ZVD8 1323 aa11.06□□□□□ -0.64
MKS1-212ENST00000583577 PNMA6FA0A0J9YX94 578 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 ZBTB5O15062 677 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 ZSCAN12O43309 604 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 ATP8B1O43520 1251 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 EFCAB14O75071 495 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 PLEKHA8P1O95397 391 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 U2AF2P26368 475 aaKnown RBP eCLIP11.05□□□□□ -0.64
MKS1-212ENST00000583577 NDUFV1P49821 464 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 CCT2P78371 535 aaKnown RBP11.05□□□□□ -0.64
MKS1-212ENST00000583577 PUM1Q14671 1186 aaKnown RBP eCLIP11.05□□□□□ -0.64
MKS1-212ENST00000583577 ST3GAL2Q16842 350 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 TMTC3Q6ZXV5 915 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
MKS1-212ENST00000583577 KIAA2013Q8IYS2 634 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 AOPEPQ8N6M6 819 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 ZNF579Q8NAF0 562 aaKnown RBP11.05□□□□□ -0.64
MKS1-212ENST00000583577 OR6J1Q8NGC5 347 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 CAGE1Q8TC20 777 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 RRP36Q96EU6 259 aaKnown RBP11.05□□□□□ -0.64
MKS1-212ENST00000583577 RPGRIP1Q96KN7 1286 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 RIPOR3Q96MK2 946 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 PIGSQ96S52 555 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 AMNQ9BXJ7 453 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 SEC63Q9UGP8 760 aaKnown RBP11.05□□□□□ -0.64
MKS1-212ENST00000583577 ABCB11O95342 1321 aa11.05□□□□□ -0.64
MKS1-212ENST00000583577 KIAA1217Q5T5P2 1943 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 CYTH3O43739 400 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 BMP15O95972 392 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 CXCL10P02778 98 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 AMHP03971 560 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 SYKP43405 635 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 NDUFA8P51970 172 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 HTRA4P83105 476 aaPredicted RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 MYL5Q02045 173 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 LRMPQ12912 555 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 CBX2Q14781 532 aaPredicted RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 SAFBQ15424 915 aaKnown RBP eCLIP11.04□□□□□ -0.64
MKS1-212ENST00000583577 DUSP28Q4G0W2 176 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 MUM1L1Q5H9M0 696 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 AXDND1Q5T1B0 1012 aaPredicted RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 NSMFQ6X4W1 530 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 ZBTB33Q86T24 672 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 C17orf53Q8N3J3 647 aaPredicted RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 CCDC82Q8N4S0 544 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 SRBD1Q8N5C6 995 aaKnown RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 TMEM105Q8N8V8 129 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 MTMR8Q96EF0 704 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 YME1L1Q96TA2 773 aa11.04□□□□□ -0.64
MKS1-212ENST00000583577 PYM1Q9BRP8 204 aaKnown RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 A1CFQ9NQ94 594 aaKnown RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 DDX41Q9UJV9 622 aaKnown RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 RALYQ9UKM9 306 aaKnown RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 MRPL11Q9Y3B7 192 aaKnown RBP11.04□□□□□ -0.64
MKS1-212ENST00000583577 UPP2O95045 317 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 ZSCAN20P17040 1043 aaPredicted RBP11.03□□□□□ -0.64
MKS1-212ENST00000583577 CDC27P30260 824 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 PTPN11Q06124 597 aaPredicted RBP11.03□□□□□ -0.64
MKS1-212ENST00000583577 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 TUBB2AQ13885 445 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 SLC35G1Q2M3R5 365 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 TPRNQ4KMQ1 711 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 BRDTQ58F21 947 aaPredicted RBP11.03□□□□□ -0.64
MKS1-212ENST00000583577 RILPL1Q5EBL4 403 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 RESP18Q5W5W9 173 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 FILIP1Q7Z7B0 1213 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 CMTR1Q8N1G2 835 aaKnown RBP11.03□□□□□ -0.64
MKS1-212ENST00000583577 MLKLQ8NB16 471 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 ALG1Q9BT22 464 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 TUBB2BQ9BVA1 445 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 WDR11Q9BZH6 1224 aa11.03□□□□□ -0.64
MKS1-212ENST00000583577 FOXP1Q9H334 677 aaPredicted RBP11.03□□□□□ -0.64
MKS1-212ENST00000583577 VTA1Q9NP79 307 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms