RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 LRRC55Q6ZSA7 311 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 FAM228AQ86W67 206 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 MB21D2Q8IYB1 491 aaPredicted RBP14.02□□□□□ -0.17
TOP3A-215ENST00000583328 ABI1Q8IZP0 508 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 CCDC82Q8N4S0 544 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 NKD2Q969F2 451 aaPredicted RBP14.02□□□□□ -0.17
TOP3A-215ENST00000583328 CASD1Q96PB1 797 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 OSMRQ99650 979 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 SPG21Q9NZD8 308 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 USP34Q70CQ2 3546 aa14.02□□□□□ -0.17
TOP3A-215ENST00000583328 DDX39AO00148 427 aaKnown RBP14.01□□□□□ -0.17
TOP3A-215ENST00000583328 ASGR2P07307 311 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 RXRAP19793 462 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 PBX3P40426 434 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 MTHFRP42898 656 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 ID4P47928 161 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 SMC1AQ14683 1233 aaKnown RBP14.01□□□□□ -0.17
TOP3A-215ENST00000583328 BMS1Q14692 1282 aaKnown RBP14.01□□□□□ -0.17
TOP3A-215ENST00000583328 ZNF484Q5JVG2 852 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 MCTP2Q6DN12 878 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 PDXDC2PQ6P474 469 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 ERMP1Q7Z2K6 904 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 HEATR3Q7Z4Q2 680 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 FRMD5Q7Z6J6 570 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 TMTC2Q8N394 836 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 MRPL43Q8N983 215 aaKnown RBP14.01□□□□□ -0.17
TOP3A-215ENST00000583328 CCDC136Q96JN2 1154 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 SMOC2Q9H3U7 446 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 AGO4Q9HCK5 861 aaKnown RBP14.01□□□□□ -0.17
TOP3A-215ENST00000583328 HCFC2Q9Y5Z7 792 aa14.01□□□□□ -0.17
TOP3A-215ENST00000583328 FAM186AA6NE01 2351 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 KIAA1671Q9BY89 1806 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 IGKV6D-21A0A0A0MT36 114 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 C2orf71A6NGG8 1288 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 CLASP2O75122 1294 aaKnown RBP14□□□□□ -0.17
TOP3A-215ENST00000583328 WEE2P0C1S8 567 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 ZSCAN20P17040 1043 aaPredicted RBP14□□□□□ -0.17
TOP3A-215ENST00000583328 ITGB3BPQ13352 177 aaPredicted RBP14□□□□□ -0.17
TOP3A-215ENST00000583328 DSC3Q14574 896 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 CEP55Q53EZ4 464 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 ATAT1Q5SQI0 421 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 RARS2Q5T160 578 aaKnown RBP14□□□□□ -0.17
TOP3A-215ENST00000583328 ABHD15Q6UXT9 468 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 CENPQQ7L2Z9 268 aaPredicted RBP14□□□□□ -0.17
TOP3A-215ENST00000583328 CKAP2LQ8IYA6 745 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 ADSSL1Q8N142 457 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 LRRC43Q8N309 656 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 METTL13Q8N6R0 699 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 TDRD5Q8NAT2 981 aaKnown RBP14□□□□□ -0.17
TOP3A-215ENST00000583328 TMEM87AQ8NBN3 555 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 PGBD1Q96JS3 809 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 ZNF302Q9NR11 478 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 LIMD1Q9UGP4 676 aa14□□□□□ -0.17
TOP3A-215ENST00000583328 PLXNA4Q9HCM2 1894 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 COL1A2P08123 1366 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 PRC1O43663 620 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 CXCL14O95715 111 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 VTNP04004 478 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 CALM1P0DP23 149 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 CALM2P0DP24 149 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 CALM3P0DP25 149 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 ZNF76P36508 570 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 CLCN5P51795 746 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 SWSAP1Q6NVH7 229 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 MIS18BP1Q6P0N0 1132 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 RAB11FIP4Q86YS3 637 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 CCDC60Q8IWA6 550 aaPredicted RBP13.99□□□□□ -0.17
TOP3A-215ENST00000583328 ZDHHC14Q8IZN3 488 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 C12orf76Q8N812 135 aaPredicted RBP13.99□□□□□ -0.17
TOP3A-215ENST00000583328 RNF169Q8NCN4 708 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 FLCNQ8NFG4 579 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 MTA3Q9BTC8 594 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 RNF19AQ9NV58 838 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 PPP4R2Q9NY27 417 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 DBR1Q9UK59 544 aaKnown RBP13.99□□□□□ -0.17
TOP3A-215ENST00000583328 CFAP54Q96N23 3096 aa13.99□□□□□ -0.17
TOP3A-215ENST00000583328 MEIS1O00470 390 aa13.98□□□□□ -0.17
TOP3A-215ENST00000583328 GPR32O75388 356 aa13.98□□□□□ -0.17
TOP3A-215ENST00000583328 CCNE2O96020 404 aa13.98□□□□□ -0.17
TOP3A-215ENST00000583328 FOSP01100 380 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-215ENST00000583328 CHMLP26374 656 aa13.98□□□□□ -0.17
TOP3A-215ENST00000583328 TRMT1LQ7Z2T5 733 aaKnown RBP13.98□□□□□ -0.17
TOP3A-215ENST00000583328 ECHDC2Q86YB7 292 aa13.98□□□□□ -0.17
TOP3A-215ENST00000583328 SLC39A11Q8N1S5 342 aa13.98□□□□□ -0.17
TOP3A-215ENST00000583328 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
TOP3A-215ENST00000583328 ANO3Q9BYT9 981 aa13.98□□□□□ -0.17
TOP3A-215ENST00000583328 ZBTB42B2RXF5 422 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 NT5C1B-RDH14C9J2C7 533 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 SH2B2O14492 632 aaPredicted RBP13.97□□□□□ -0.17
TOP3A-215ENST00000583328 C22orf31O95567 290 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 GSPT1P15170 499 aaKnown RBP13.97□□□□□ -0.17
TOP3A-215ENST00000583328 ATP4AP20648 1035 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 MCM5P33992 734 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 ALDH7A1P49419 539 aaKnown RBP13.97□□□□□ -0.17
TOP3A-215ENST00000583328 METAP2P50579 478 aaKnown RBP eCLIP13.97□□□□□ -0.17
TOP3A-215ENST00000583328 NAPAP54920 295 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 TTC22Q5TAA0 569 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 KANK3Q6NY19 840 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 TMTC3Q6ZXV5 915 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms