RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 TMX3Q96JJ7 454 aa29.4■■■□□ 2.3
LIMD2-208ENST00000579814 TSPYL2Q9H2G4 693 aaPredicted RBP29.4■■■□□ 2.3
LIMD2-208ENST00000579814 ERVK-5Q9HDB9 667 aa29.4■■■□□ 2.3
LIMD2-208ENST00000579814 TMEM150BA6NC51 233 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 EPOPA6NHQ4 379 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 CDC42EP1Q00587 391 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 SPIRE1Q08AE8 756 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 ANO5Q75V66 913 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 SPRED2Q7Z698 418 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 TMEM40Q8WWA1 233 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 JPH2Q9BR39 696 aaPredicted RBP29.39■■■□□ 2.3
LIMD2-208ENST00000579814 TMX1Q9H3N1 280 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 TTC12Q9H892 705 aaPredicted RBP29.39■■■□□ 2.3
LIMD2-208ENST00000579814 MTUS1Q9ULD2 1270 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 ST3GAL5Q9UNP4 418 aa29.39■■■□□ 2.3
LIMD2-208ENST00000579814 WNT7AO00755 349 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 POU3F3P20264 500 aaPredicted RBP29.38■■■□□ 2.29
LIMD2-208ENST00000579814 MCM7P33993 719 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 TXKP42681 527 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 OTUD6AQ7L8S5 288 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.38■■■□□ 2.29
LIMD2-208ENST00000579814 C4orf19Q8IY42 314 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 LINC01599Q8WXQ3 324 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 MTMR9Q96QG7 549 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 CEP89Q96ST8 783 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 SH2D3AQ9BRG2 576 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 LXNQ9BS40 222 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 ADAMTS10Q9H324 1103 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 ZSWIM4Q9H7M6 989 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 RGL1Q9NZL6 768 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 CHD9Q3L8U1 2897 aa29.38■■■□□ 2.29
LIMD2-208ENST00000579814 MAFO75444 373 aaPredicted RBP29.37■■■□□ 2.29
LIMD2-208ENST00000579814 NOSTRINQ8IVI9 506 aa29.37■■■□□ 2.29
LIMD2-208ENST00000579814 EXOC8Q8IYI6 725 aa29.37■■■□□ 2.29
LIMD2-208ENST00000579814 DYDC2Q96IM9 177 aa29.37■■■□□ 2.29
LIMD2-208ENST00000579814 SCLT1Q96NL6 688 aa29.37■■■□□ 2.29
LIMD2-208ENST00000579814 SAMD11Q96NU1 681 aa29.37■■■□□ 2.29
LIMD2-208ENST00000579814 CYP26B1Q9NR63 512 aa29.37■■■□□ 2.29
LIMD2-208ENST00000579814 PPME1Q9Y570 386 aa29.37■■■□□ 2.29
LIMD2-208ENST00000579814 MYO9BQ13459 2157 aa29.37■■■□□ 2.29
LIMD2-208ENST00000579814 CDH23Q9H251 3354 aa29.36■■■□□ 2.29
LIMD2-208ENST00000579814 IGKV6-21A0A0C4DH24 114 aa29.36■■■□□ 2.29
LIMD2-208ENST00000579814 STAG3L1P0CL83 205 aa29.36■■■□□ 2.29
LIMD2-208ENST00000579814 EIF4BP23588 611 aaKnown RBP29.36■■■□□ 2.29
LIMD2-208ENST00000579814 GRB10Q13322 594 aa29.36■■■□□ 2.29
LIMD2-208ENST00000579814 CCDC85BQ15834 202 aaPredicted RBP29.36■■■□□ 2.29
LIMD2-208ENST00000579814 PLA2G4FQ68DD2 849 aa29.36■■■□□ 2.29
LIMD2-208ENST00000579814 TPH2Q8IWU9 490 aa29.36■■■□□ 2.29
LIMD2-208ENST00000579814 CEP170P1Q96L14 293 aa29.36■■■□□ 2.29
LIMD2-208ENST00000579814 RNF216Q9NWF9 866 aaPredicted RBP29.36■■■□□ 2.29
LIMD2-208ENST00000579814 DENND3A2RUS2 1198 aa29.35■■■□□ 2.29
LIMD2-208ENST00000579814 CD2BP2O95400 341 aaKnown RBP29.35■■■□□ 2.29
LIMD2-208ENST00000579814 YWHABP31946 246 aaKnown RBP29.35■■■□□ 2.29
LIMD2-208ENST00000579814 GPC3P51654 580 aa29.35■■■□□ 2.29
LIMD2-208ENST00000579814 ORC2Q13416 577 aaPredicted RBP29.35■■■□□ 2.29
LIMD2-208ENST00000579814 CTTNQ14247 550 aaKnown RBP29.35■■■□□ 2.29
LIMD2-208ENST00000579814 FAM228AQ86W67 206 aa29.35■■■□□ 2.29
LIMD2-208ENST00000579814 NPAS4Q8IUM7 802 aa29.35■■■□□ 2.29
LIMD2-208ENST00000579814 MICALL1Q8N3F8 863 aa29.35■■■□□ 2.29
LIMD2-208ENST00000579814 FIBCD1Q8N539 461 aa29.35■■■□□ 2.29
LIMD2-208ENST00000579814 NLRP7Q8WX94 980 aa29.35■■■□□ 2.29
LIMD2-208ENST00000579814 EIF2AK1Q9BQI3 630 aaKnown RBP29.35■■■□□ 2.29
LIMD2-208ENST00000579814 C17orf80Q9BSJ5 609 aa29.35■■■□□ 2.29
LIMD2-208ENST00000579814 WRAP73Q9P2S5 460 aaPredicted RBP29.35■■■□□ 2.29
LIMD2-208ENST00000579814 NOL7Q9UMY1 257 aaKnown RBP29.35■■■□□ 2.29
LIMD2-208ENST00000579814 MTCH2Q9Y6C9 303 aa29.35■■■□□ 2.29
LIMD2-208ENST00000579814 GBF1Q92538 1859 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 SLITRK3O94933 977 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 TRAPPC10P48553 1259 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 NPEPPSP55786 919 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 CYP4A11Q02928 519 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 ZNF174Q15697 407 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 NEK9Q8TD19 979 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 SLC7A3Q8WY07 619 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 ADAM2Q99965 735 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 TMEM60Q9H2L4 133 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 C1orf112Q9NSG2 853 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 SUCLA2Q9P2R7 463 aaPredicted RBP29.34■■■□□ 2.29
LIMD2-208ENST00000579814 LRFN2Q9ULH4 789 aa29.34■■■□□ 2.29
LIMD2-208ENST00000579814 MYH9P35579 1960 aaKnown RBP29.33■■■□□ 2.29
LIMD2-208ENST00000579814 DRP2Q13474 957 aa29.33■■■□□ 2.29
LIMD2-208ENST00000579814 TTC38Q5R3I4 469 aa29.33■■■□□ 2.29
LIMD2-208ENST00000579814 FBXO22Q8NEZ5 403 aa29.33■■■□□ 2.29
LIMD2-208ENST00000579814 ZNF668Q96K58 619 aaPredicted RBP29.33■■■□□ 2.29
LIMD2-208ENST00000579814 HSD17B14Q9BPX1 270 aa29.33■■■□□ 2.29
LIMD2-208ENST00000579814 RGS18Q9NS28 235 aa29.33■■■□□ 2.29
LIMD2-208ENST00000579814 PCDHB7Q9Y5E2 793 aa29.33■■■□□ 2.29
LIMD2-208ENST00000579814 MICAL3Q7RTP6 2002 aa29.33■■■□□ 2.29
LIMD2-208ENST00000579814 LPXNO60711 386 aa29.32■■■□□ 2.28
LIMD2-208ENST00000579814 DGKIO75912 1065 aa29.32■■■□□ 2.28
LIMD2-208ENST00000579814 U2AF2P26368 475 aaKnown RBP eCLIP29.32■■■□□ 2.28
LIMD2-208ENST00000579814 RFC5P40937 340 aa29.32■■■□□ 2.28
LIMD2-208ENST00000579814 SARSP49591 514 aaKnown RBP29.32■■■□□ 2.28
LIMD2-208ENST00000579814 POLGP54098 1239 aaPredicted RBP29.32■■■□□ 2.28
LIMD2-208ENST00000579814 BTG3Q14201 252 aaPredicted RBP29.32■■■□□ 2.28
LIMD2-208ENST00000579814 EPC2Q52LR7 807 aa29.32■■■□□ 2.28
LIMD2-208ENST00000579814 SLC24A5Q71RS6 500 aa29.32■■■□□ 2.28
LIMD2-208ENST00000579814 ZNF689Q96CS4 500 aaPredicted RBP29.32■■■□□ 2.28
LIMD2-208ENST00000579814 BACH2Q9BYV9 841 aa29.32■■■□□ 2.28
LIMD2-208ENST00000579814 GCOM2Q9BZD3 368 aaPredicted RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms