RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 SASH1O94885 1247 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 P4HA1P13674 534 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 BMP6P22004 513 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 ALDH1B1P30837 517 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 AK2P54819 239 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 AP2B1P63010 937 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 MPP1Q00013 466 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 IKQ13123 557 aaPredicted RBP7.3□□□□□ -1.24
COPS3-216ENST00000579716 MTMR1Q13613 665 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 KCNMB1Q16558 191 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 SPDYCQ5MJ68 293 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 MAP1SQ66K74 1059 aaPredicted RBP7.3□□□□□ -1.24
COPS3-216ENST00000579716 TRIM74Q86UV6 250 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 TRIM73Q86UV7 250 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 CCDC65Q8IXS2 484 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 TBC1D22AQ8WUA7 517 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 CTNNBL1Q8WYA6 563 aaPredicted RBP7.3□□□□□ -1.24
COPS3-216ENST00000579716 DPF3Q92784 378 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 GCC1Q96CN9 775 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 DHTKD1Q96HY7 919 aaPredicted RBP7.3□□□□□ -1.24
COPS3-216ENST00000579716 SLC38A3Q99624 504 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 MYD88Q99836 296 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 HAUS7Q99871 368 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 LRRCC1Q9C099 1032 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 KCNK12Q9HB15 430 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 TOPORSQ9NS56 1045 aaPredicted RBP7.3□□□□□ -1.24
COPS3-216ENST00000579716 SEMA3GQ9NS98 782 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 SLC5A4Q9NY91 659 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 ADAMTS1Q9UHI8 967 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 ZNF112Q9UJU3 913 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 TRAK1Q9UPV9 953 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 EFR3BQ9Y2G0 817 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 MTF2Q9Y483 593 aaPredicted RBP7.3□□□□□ -1.24
COPS3-216ENST00000579716 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.3□□□□□ -1.24
COPS3-216ENST00000579716 CSADQ9Y600 493 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 PTCH2Q9Y6C5 1203 aa7.3□□□□□ -1.24
COPS3-216ENST00000579716 hCG_1642624A0A1W2PR95 340 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 NDC80O14777 642 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 TLR5O60602 858 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 KLHL41O60662 606 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 DKC1O60832 514 aaKnown RBP eCLIP7.29□□□□□ -1.24
COPS3-216ENST00000579716 ABLIM3O94929 683 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 STAMBPO95630 424 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 APBB3O95704 486 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 IL33O95760 270 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 TSPAN15O95858 294 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 SLC4A1P02730 911 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 EIF4BP23588 611 aaKnown RBP7.29□□□□□ -1.24
COPS3-216ENST00000579716 TMOD1P28289 359 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 CLNS1AP54105 237 aaKnown RBP7.29□□□□□ -1.24
COPS3-216ENST00000579716 RASA2Q15283 850 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 SETMARQ53H47 684 aaPredicted RBP7.29□□□□□ -1.24
COPS3-216ENST00000579716 ANKRD39Q53RE8 183 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 MUM1L1Q5H9M0 696 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 CNSTQ6PJW8 725 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 KDELC1Q6UW63 502 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 DTHD1Q6ZMT9 781 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 NEK10Q6ZWH5 1172 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 RNF180Q86T96 592 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 KRT222Q8N1A0 295 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 AFAP1L2Q8N4X5 818 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.29□□□□□ -1.24
COPS3-216ENST00000579716 ASB11Q8WXH4 323 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.29□□□□□ -1.24
COPS3-216ENST00000579716 CCDC114Q96M63 670 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 ADPGKQ9BRR6 497 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 SPON2Q9BUD6 331 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 ISCA1Q9BUE6 129 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 TRIM7Q9C029 511 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 NACA2Q9H009 215 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 ZWILCHQ9H900 591 aa7.29□□□□□ -1.24
COPS3-216ENST00000579716 LUC7LQ9NQ29 371 aaKnown RBP7.29□□□□□ -1.24
COPS3-216ENST00000579716 CWC15Q9P013 229 aaKnown RBP7.29□□□□□ -1.24
COPS3-216ENST00000579716 EPN1Q9Y6I3 576 aaPredicted RBP7.29□□□□□ -1.24
COPS3-216ENST00000579716 FAM221AA4D161 298 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 PRR33A8MZF0 331 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 PMM2O15305 246 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 SMC2O95347 1197 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 IMPDH2P12268 514 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 XPAP23025 273 aaPredicted RBP7.28□□□□□ -1.24
COPS3-216ENST00000579716 CHKAP35790 457 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 KCNJ6P48051 423 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 IKZF1Q13422 519 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 GBX1Q14549 363 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 SLC14A2Q15849 920 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 MTERF2Q49AM1 385 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 TTC19Q6DKK2 380 aaPredicted RBP7.28□□□□□ -1.24
COPS3-216ENST00000579716 LLGL2Q6P1M3 1020 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 TATDN1Q6P1N9 297 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 XRRA1Q6P2D8 792 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 ARHGEF18Q6ZSZ5 1173 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 GALNT13Q8IUC8 556 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 AFAP1Q8N556 730 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 DCLK2Q8N568 766 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 C3orf58Q8NDZ4 430 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 PARD3BQ8TEW8 1205 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 C1orf74Q96LT6 269 aa7.28□□□□□ -1.24
COPS3-216ENST00000579716 ALPK1Q96QP1 1244 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms