RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 BMS1Q14692 1282 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-213ENST00000579605 SUMF1Q8NBK3 374 aa15.14■□□□□ 0.01
CDK5RAP3-213ENST00000579605 AZI2Q9H6S1 392 aa15.14■□□□□ 0.01
CDK5RAP3-213ENST00000579605 TBC1D17Q9HA65 648 aa15.14■□□□□ 0.01
CDK5RAP3-213ENST00000579605 FRYLO94915 3013 aa15.14■□□□□ 0.01
CDK5RAP3-213ENST00000579605 KDM3AQ9Y4C1 1321 aa15.14■□□□□ 0.01
CDK5RAP3-213ENST00000579605 PNMA6FA0A0J9YX94 578 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 PALM3A6NDB9 673 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 ACACBO00763 2458 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 GPR182O15218 404 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 KINO60870 393 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 SDHBP21912 280 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 KLRC1P26715 233 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 VARS2Q5ST30 1063 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 ODR4Q5SWX8 454 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 MTHFD1LQ6UB35 978 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 C1orf210Q8IVY1 113 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 SLC39A11Q8N1S5 342 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 TNPO1Q92973 898 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 CUL5Q93034 780 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 DOCK5Q9H7D0 1870 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 WNT16Q9UBV4 365 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 SIT1Q9Y3P8 196 aa15.13■□□□□ 0.01
CDK5RAP3-213ENST00000579605 KAT6AQ92794 2004 aa15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 COL9A2Q14055 689 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 VPS52Q8N1B4 723 aa15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 LRRC43Q8N309 656 aa15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 GPRASP2Q96D09 838 aa15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 RIOX1Q9H6W3 641 aa15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 ELAC1Q9H777 363 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 RNF19AQ9NV58 838 aa15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 CDV3Q9UKY7 258 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 CEP250Q9BV73 2442 aa15.12■□□□□ 0.01
CDK5RAP3-213ENST00000579605 POTEMA6NI47 508 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 CYTH3O43739 400 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 ITGB5P18084 799 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 GBP2P32456 591 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 KIZQ2M2Z5 673 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 POTEGQ6S5H5 508 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 GPR149Q86SP6 731 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 FAM228AQ86W67 206 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 KIAA0319LQ8IZA0 1049 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 SLC22A17Q8WUG5 538 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 CDHR1Q96JP9 859 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 OSMRQ99650 979 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 IGSF9Q9P2J2 1179 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 ZBTB47Q9UFB7 747 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 PCDHB15Q9Y5E8 787 aa15.11■□□□□ 0.01
CDK5RAP3-213ENST00000579605 MYH6P13533 1939 aa15.1■□□□□ 0.01
CDK5RAP3-213ENST00000579605 HOXA2O43364 376 aa15.1■□□□□ 0.01
CDK5RAP3-213ENST00000579605 ALDH7A1P49419 539 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-213ENST00000579605 STAT5BP51692 787 aa15.1■□□□□ 0.01
CDK5RAP3-213ENST00000579605 BCAR1P56945 870 aa15.1■□□□□ 0.01
CDK5RAP3-213ENST00000579605 MTMR1Q13613 665 aa15.1■□□□□ 0.01
CDK5RAP3-213ENST00000579605 TMEM169Q96HH4 297 aa15.1■□□□□ 0.01
CDK5RAP3-213ENST00000579605 SFXN1Q9H9B4 322 aa15.1■□□□□ 0.01
CDK5RAP3-213ENST00000579605 CFAP47Q6ZTR5 3102 aa15.1■□□□□ 0.01
CDK5RAP3-213ENST00000579605 LRRN2O75325 713 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 MYBP10242 640 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 COL9A3Q14050 684 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 DSC3Q14574 896 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 NONOQ15233 471 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 LETM2Q2VYF4 491 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 SLC44A3Q8N4M1 653 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 ST13P5Q8NFI4 369 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 HELQQ8TDG4 1101 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 GPR152Q8TDT2 470 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 FOXQ1Q9C009 403 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 KRT23Q9C075 422 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 ZBP1Q9H171 429 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 JPH1Q9HDC5 661 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 DLGAP2Q9P1A6 1054 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 SLC9A2Q9UBY0 812 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 USP18Q9UMW8 372 aa15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 FNDC1Q4ZHG4 1894 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-213ENST00000579605 PRR5-ARHGAP8B1AHC4 643 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 MEIS2O14770 477 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 N4BP1O75113 896 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 ADRB1P08588 477 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 GLULP15104 373 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 ZSCAN20P17040 1043 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 NT5C2P49902 561 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 CRYBB1P53674 252 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 MFAP1P55081 439 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 ARHGAP8P85298 464 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 GRM4Q14833 912 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 SEC23AQ15436 765 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 CLLU1OSQ5K130 101 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 PLPPR4Q7Z2D5 763 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 ECHDC2Q86YB7 292 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 GPR161Q8N6U8 529 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 SPTBN2O15020 2390 aa15.08■□□□□ 0
CDK5RAP3-213ENST00000579605 VTNP04004 478 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 KCNA4P22459 653 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 KLRC2P26717 231 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 ACTR2P61160 394 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 CYB5R4Q7L1T6 521 aa15.07■□□□□ 0
CDK5RAP3-213ENST00000579605 TRMT1LQ7Z2T5 733 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms