RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 GHRP10912 638 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 CCT6AP40227 531 aaKnown RBP11.2□□□□□ -0.62
MKS1-208ENST00000579358 CRYBB1P53674 252 aaPredicted RBP11.2□□□□□ -0.62
MKS1-208ENST00000579358 POLGP54098 1239 aaPredicted RBP11.2□□□□□ -0.62
MKS1-208ENST00000579358 SMAD3P84022 425 aaKnown RBP11.2□□□□□ -0.62
MKS1-208ENST00000579358 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
MKS1-208ENST00000579358 IKBKEQ14164 716 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 LPIN1Q14693 890 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 PTPAQ15257 358 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 XKR9Q5GH70 373 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 SPRYD3Q8NCJ5 442 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 DBF4BQ8NFT6 615 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 PHOSPHO2Q8TCD6 241 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 CCDC43Q96MW1 224 aaKnown RBP11.2□□□□□ -0.62
MKS1-208ENST00000579358 NACC1Q96RE7 527 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 SLC9A7Q96T83 725 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 SH2D3AQ9BRG2 576 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 IFIH1Q9BYX4 1025 aaKnown RBP11.2□□□□□ -0.62
MKS1-208ENST00000579358 SUGCTQ9HAC7 445 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 CXXC1Q9P0U4 656 aaPredicted RBP11.2□□□□□ -0.62
MKS1-208ENST00000579358 AKT3Q9Y243 479 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
MKS1-208ENST00000579358 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.19□□□□□ -0.62
MKS1-208ENST00000579358 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.19□□□□□ -0.62
MKS1-208ENST00000579358 VWA3AA6NCI4 1184 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 ZBTB39O15060 712 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 GPR32O75388 356 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 VTNP04004 478 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 LONP1P36776 959 aaKnown RBP11.19□□□□□ -0.62
MKS1-208ENST00000579358 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
MKS1-208ENST00000579358 FXR1P51114 621 aaKnown RBP eCLIP11.19□□□□□ -0.62
MKS1-208ENST00000579358 GPC3P51654 580 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 WDR5P61964 334 aaKnown RBP11.19□□□□□ -0.62
MKS1-208ENST00000579358 TMEM62Q0P6H9 643 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 EMC2Q15006 297 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 TCTN1Q2MV58 587 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 ODR4Q5SWX8 454 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 HYIQ5T013 277 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 GPR153Q6NV75 609 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 FAM173BQ6P4H8 233 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 POTEGQ6S5H5 508 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 ZNF410Q86VK4 478 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
MKS1-208ENST00000579358 PIGOQ8TEQ8 1089 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 TCP11Q8WWU5 503 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 ZNF396Q96N95 335 aaPredicted RBP11.19□□□□□ -0.62
MKS1-208ENST00000579358 USP28Q96RU2 1077 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 MTRQ99707 1265 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 MMTAG2Q9BU76 263 aaKnown RBP11.19□□□□□ -0.62
MKS1-208ENST00000579358 OSBPL7Q9BZF2 842 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 NT5C3AQ9H0P0 336 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 ADAMTS10Q9H324 1103 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 ATP6V0A4Q9HBG4 840 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 SLC4A7Q9Y6M7 1214 aa11.19□□□□□ -0.62
MKS1-208ENST00000579358 PP2D1A8MPX8 630 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 YEATS4O95619 227 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 ATP2A2P16615 1042 aaKnown RBP11.18□□□□□ -0.62
MKS1-208ENST00000579358 KCNJ6P48051 423 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 NLRP11P59045 1033 aaKnown RBP11.18□□□□□ -0.62
MKS1-208ENST00000579358 PAK2Q13177 524 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 DRP2Q13474 957 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 PKP1Q13835 747 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 KIZQ2M2Z5 673 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 ATL3Q6DD88 541 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 TMEM40Q8WWA1 233 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 PSPC1Q8WXF1 523 aaKnown RBP11.18□□□□□ -0.62
MKS1-208ENST00000579358 OSMRQ99650 979 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 FTHL17Q9BXU8 183 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 AGO3Q9H9G7 860 aaKnown RBP11.18□□□□□ -0.62
MKS1-208ENST00000579358 XPNPEP1Q9NQW7 623 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 DDX19AQ9NUU7 478 aaKnown RBP11.18□□□□□ -0.62
MKS1-208ENST00000579358 SUCLA2Q9P2R7 463 aaPredicted RBP11.18□□□□□ -0.62
MKS1-208ENST00000579358 GINS2Q9Y248 185 aa11.18□□□□□ -0.62
MKS1-208ENST00000579358 TMEM265A0A087WTH1 108 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 ARHGEF35A5YM69 484 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 SOX1O00570 391 aaPredicted RBP11.17□□□□□ -0.62
MKS1-208ENST00000579358 GPR182O15218 404 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 ASAP2O43150 1006 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 USO1O60763 962 aaKnown RBP11.17□□□□□ -0.62
MKS1-208ENST00000579358 RPS6KA5O75582 802 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 BRD1O95696 1058 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 DARSP14868 501 aaKnown RBP11.17□□□□□ -0.62
MKS1-208ENST00000579358 EIF4BP23588 611 aaKnown RBP11.17□□□□□ -0.62
MKS1-208ENST00000579358 CDC25AP30304 524 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 CD52P31358 61 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 MXD4Q14582 209 aaPredicted RBP11.17□□□□□ -0.62
MKS1-208ENST00000579358 SLC39A14Q15043 492 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 ECM1Q16610 540 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 LINC00301Q8NCQ3 95 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 MCPH1Q8NEM0 835 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 NLRP7Q8WX94 980 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 SCLT1Q96NL6 688 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 PPP1R16BQ96T49 567 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 INO80BQ9C086 356 aaPredicted RBP11.17□□□□□ -0.62
MKS1-208ENST00000579358 CDHR5Q9HBB8 845 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 ERVK-5Q9HDB9 667 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 FBXO2Q9UK22 296 aaPredicted RBP11.17□□□□□ -0.62
MKS1-208ENST00000579358 PADI3Q9ULW8 664 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 KIAA1024Q9UPX6 916 aa11.17□□□□□ -0.62
MKS1-208ENST00000579358 DNM3Q9UQ16 869 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms