RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 ZBTB40Q9NUA8 1239 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 HPCAL4Q9UM19 191 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 CHMP2BQ9UQN3 213 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 TNRQ92752 1358 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 KRT87PA6NCN2 255 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 GTPBP6O43824 516 aaPredicted RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 RPSAP08865 295 aaKnown RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 ESRRAP11474 423 aaPredicted RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 HDAC4P56524 1084 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 SUPT20HL1Q3ZLR7 823 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 E4F1Q66K89 784 aaPredicted RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 DDX17Q92841 729 aaKnown RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 HEXIM2Q96MH2 286 aaKnown RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 BICRAQ9NZM4 1560 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 NEDD4P46934 1319 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 ZNF197O14709 1029 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 KRT14P02533 472 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 KRT6AP02538 564 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 KRT6BP04259 564 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 PSMA3P25788 255 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 CCND2P30279 289 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 OLR1P78380 273 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 ABCB5Q2M3G0 1257 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 BBS9Q3SYG4 887 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 TJAP1Q5JTD0 557 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 ST13P4Q8IZP2 240 aaPredicted RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 ING2Q9H160 280 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 RSL24D1Q9UHA3 163 aaKnown RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 PCDHA1Q9Y5I3 950 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 PRPF4O43172 522 aaKnown RBP eCLIP5.47□□□□□ -1.532e-6■■■■□ 26.6
NF1-219ENST00000579081 STRNO43815 780 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 ZBED1O96006 694 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 MYL3P08590 195 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 FBLN1P23142 703 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 SCNN1DP51172 638 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 PMS1P54277 932 aaKnown RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 CYP4A11Q02928 519 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 PRKCQQ04759 706 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 EHHADHQ08426 723 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 GRAMD1BQ3KR37 738 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 FAM173BQ6P4H8 233 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 FKBP9P1Q75LS8 142 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 TBC1D19Q8N5T2 526 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 PPHLN1Q8NEY8 458 aaKnown RBP5.47□□□□□ -1.53
NF1-219ENST00000579081 CNKSR1Q969H4 720 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 GINM1Q9NU53 330 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 ARHGAP26Q9UNA1 814 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 PLEKHG1Q9ULL1 1385 aa5.47□□□□□ -1.53
NF1-219ENST00000579081 USP17L12C9JPN9 530 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 USP17L21D6R901 530 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 ADSLP30566 484 aaPredicted RBP5.46□□□□□ -1.53
NF1-219ENST00000579081 FAM98CQ17RN3 349 aaKnown RBP5.46□□□□□ -1.53
NF1-219ENST00000579081 DCAF4L1Q3SXM0 396 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 YTHDF3Q7Z739 585 aaKnown RBP5.46□□□□□ -1.53
NF1-219ENST00000579081 KBTBD3Q8NAB2 608 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 ZFP42Q96MM3 310 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 ZNF577Q9BSK1 485 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 CCDC90BQ9GZT6 254 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 C14orf93Q9H972 538 aaKnown RBP5.46□□□□□ -1.53
NF1-219ENST00000579081 DYRK4Q9NR20 520 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 UBAP1Q9NZ09 502 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 RGL1Q9NZL6 768 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 M0R3G1 203 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 AARSP49588 968 aaKnown RBP eCLIP5.46□□□□□ -1.539e-8■■■■■ 61.8
NF1-219ENST00000579081 MDH1BQ5I0G3 518 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 CHMP1BQ7LBR1 199 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 B4GALNT2Q8NHY0 566 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 ZSCAN10Q96SZ4 725 aaPredicted RBP5.46□□□□□ -1.53
NF1-219ENST00000579081 NOP53Q9NZM5 478 aaKnown RBP5.46□□□□□ -1.53
NF1-219ENST00000579081 CLCA2Q9UQC9 943 aa5.46□□□□□ -1.53
NF1-219ENST00000579081 BTDP43251 543 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 RPS8P62241 208 aaKnown RBP5.46□□□□□ -1.54
NF1-219ENST00000579081 ANGPT1Q15389 498 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 NUDT18Q6ZVK8 323 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 PDCD6IPQ8WUM4 868 aaKnown RBP5.46□□□□□ -1.54
NF1-219ENST00000579081 OTULINQ96BN8 352 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 XPO4Q9C0E2 1151 aaKnown RBP5.46□□□□□ -1.54
NF1-219ENST00000579081 HDAC6Q9UBN7 1215 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 BLOC1S6Q9UL45 172 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 ARL2BPQ9Y2Y0 163 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 KIF1BO60333 1816 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 USP19O94966 1318 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 KLRF2D3W0D1 207 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 FMNL1O95466 1100 aaPredicted RBP5.46□□□□□ -1.54
NF1-219ENST00000579081 KRT72Q14CN4 511 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 THEMIS2Q5TEJ8 643 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 HNRNPLLQ8WVV9 542 aaKnown RBP5.46□□□□□ -1.54
NF1-219ENST00000579081 ASIC4Q96FT7 647 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 CEP170P1Q96L14 293 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 KLC2Q9H0B6 622 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 ATG3Q9NT62 314 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 ADGRL3Q9HAR2 1447 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 TTC37Q6PGP7 1564 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 MROH7-TTC4A0A0A0MT08 1334 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 MROH7Q68CQ1 1323 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 ATP7BP35670 1465 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 AFPP02771 609 aaKnown RBP5.46□□□□□ -1.54
NF1-219ENST00000579081 RPN1P04843 607 aaKnown RBP5.46□□□□□ -1.54
NF1-219ENST00000579081 GSNP06396 782 aa5.46□□□□□ -1.54
NF1-219ENST00000579081 PSMD2Q13200 908 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms