RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 DENND3A2RUS2 1198 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 CHMP2AO43633 222 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 NCK2O43639 380 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 GPR32O75388 356 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 TDP2O95551 362 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 VTNP04004 478 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 GCFC2P16383 781 aaKnown RBP13.01□□□□□ -0.33
SSH2-208ENST00000579040 CLCN3P51790 818 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 COL19A1Q14993 1142 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 KIZQ2M2Z5 673 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 EFCAB12Q6NXP0 572 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 B3GNT9Q6UX72 402 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 MIER3Q7Z3K6 550 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 ETNPPLQ8TBG4 499 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 OSMRQ99650 979 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 RGS18Q9NS28 235 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 TPCN1Q9ULQ1 816 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 ST3GAL5Q9UNP4 418 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 PLXNA4Q9HCM2 1894 aa13.01□□□□□ -0.33
SSH2-208ENST00000579040 CCDC194A0A1B0GVG4 234 aa13□□□□□ -0.33
SSH2-208ENST00000579040 C9IYK1 514 aa13□□□□□ -0.33
SSH2-208ENST00000579040 MGEA5O60502 916 aa13□□□□□ -0.33
SSH2-208ENST00000579040 TBC1D8BQ0IIM8 1120 aa13□□□□□ -0.33
SSH2-208ENST00000579040 UGCGQ16739 394 aa13□□□□□ -0.33
SSH2-208ENST00000579040 INF2Q27J81 1249 aa13□□□□□ -0.33
SSH2-208ENST00000579040 PUS10Q3MIT2 529 aaKnown RBP13□□□□□ -0.33
SSH2-208ENST00000579040 XKR3Q5GH77 459 aa13□□□□□ -0.33
SSH2-208ENST00000579040 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
SSH2-208ENST00000579040 SLC24A5Q71RS6 500 aa13□□□□□ -0.33
SSH2-208ENST00000579040 TRMT1LQ7Z2T5 733 aaKnown RBP13□□□□□ -0.33
SSH2-208ENST00000579040 FAM228AQ86W67 206 aa13□□□□□ -0.33
SSH2-208ENST00000579040 WASF1Q92558 559 aa13□□□□□ -0.33
SSH2-208ENST00000579040 PABPC5Q96DU9 382 aaKnown RBP13□□□□□ -0.33
SSH2-208ENST00000579040 NECAB3Q96P71 396 aaPredicted RBP13□□□□□ -0.33
SSH2-208ENST00000579040 NAP1L4Q99733 375 aaKnown RBP13□□□□□ -0.33
SSH2-208ENST00000579040 ADAM2Q99965 735 aa13□□□□□ -0.33
SSH2-208ENST00000579040 DDX25Q9UHL0 483 aaKnown RBP13□□□□□ -0.33
SSH2-208ENST00000579040 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
SSH2-208ENST00000579040 AKT3Q9Y243 479 aa13□□□□□ -0.33
SSH2-208ENST00000579040 PCDHB7Q9Y5E2 793 aa13□□□□□ -0.33
SSH2-208ENST00000579040 MRPL42Q9Y6G3 142 aaKnown RBP13□□□□□ -0.33
SSH2-208ENST00000579040 SPTBN5Q9NRC6 3674 aaKnown RBP13□□□□□ -0.33
SSH2-208ENST00000579040 GRM6O15303 877 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 MMP1P03956 469 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 KCNA5P22460 613 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 AK2P54819 239 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 NLRP11P59045 1033 aaKnown RBP12.99□□□□□ -0.33
SSH2-208ENST00000579040 CDC42EP1Q00587 391 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 DSC3Q14574 896 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 TARBP2Q15633 366 aaKnown RBP12.99□□□□□ -0.33
SSH2-208ENST00000579040 PAN2Q504Q3 1202 aaKnown RBP12.99□□□□□ -0.33
SSH2-208ENST00000579040 PPP4R3AQ6IN85 833 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 NEK8Q86SG6 692 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 NEK9Q8TD19 979 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 GJA10Q969M2 543 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 FAM20AQ96MK3 541 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 PPP1R16BQ96T49 567 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 NIFKQ9BYG3 293 aaKnown RBP12.99□□□□□ -0.33
SSH2-208ENST00000579040 ADAMTS10Q9H324 1103 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 ELAC1Q9H777 363 aaKnown RBP12.99□□□□□ -0.33
SSH2-208ENST00000579040 TMEM161AQ9NX61 479 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 ORC3Q9UBD5 711 aaPredicted RBP12.99□□□□□ -0.33
SSH2-208ENST00000579040 PLAGL2Q9UPG8 496 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
SSH2-208ENST00000579040 TBX3O15119 743 aa12.98□□□□□ -0.33
SSH2-208ENST00000579040 EIF4BP23588 611 aaKnown RBP12.98□□□□□ -0.33
SSH2-208ENST00000579040 FAM189BP81408 668 aa12.98□□□□□ -0.33
SSH2-208ENST00000579040 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
SSH2-208ENST00000579040 LETM2Q2VYF4 491 aa12.98□□□□□ -0.33
SSH2-208ENST00000579040 LRRC71Q8N4P6 559 aa12.98□□□□□ -0.33
SSH2-208ENST00000579040 PPP2R3CQ969Q6 453 aa12.98□□□□□ -0.33
SSH2-208ENST00000579040 KCNMB3Q9NPA1 279 aa12.98□□□□□ -0.33
SSH2-208ENST00000579040 AAASQ9NRG9 546 aa12.98□□□□□ -0.33
SSH2-208ENST00000579040 SEPT9Q9UHD8 586 aaPredicted RBP12.98□□□□□ -0.33
SSH2-208ENST00000579040 HOXA2O43364 376 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 SLC37A4O43826 429 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 DKC1O60832 514 aaKnown RBP eCLIP12.97□□□□□ -0.33
SSH2-208ENST00000579040 STBD1O95210 358 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 CTDNEP1O95476 244 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 ITGB1P05556 798 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 DARSP14868 501 aaKnown RBP12.97□□□□□ -0.33
SSH2-208ENST00000579040 DNM2P50570 870 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 GPC3P51654 580 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 PSMC5P62195 406 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 CSPP1Q1MSJ5 1256 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 PTCRAQ6ISU1 281 aaPredicted RBP12.97□□□□□ -0.33
SSH2-208ENST00000579040 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.97□□□□□ -0.33
SSH2-208ENST00000579040 GTF3C6Q969F1 213 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 SCLT1Q96NL6 688 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 JPH2Q9BR39 696 aaPredicted RBP12.97□□□□□ -0.33
SSH2-208ENST00000579040 ATP6V0A4Q9HBG4 840 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 BRMS1Q9HCU9 246 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 FAM50BQ9Y247 325 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 PCDHB12Q9Y5F1 795 aa12.97□□□□□ -0.33
SSH2-208ENST00000579040 IGKV6-21A0A0C4DH24 114 aa12.96□□□□□ -0.33
SSH2-208ENST00000579040 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
SSH2-208ENST00000579040 TBKBP1A7MCY6 615 aa12.96□□□□□ -0.33
SSH2-208ENST00000579040 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.33
SSH2-208ENST00000579040 GATMP50440 423 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms