RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 KIF5BP33176 963 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 PBX3P40426 434 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 SLC26A2P50443 739 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 CRYBB1P53674 252 aaPredicted RBP10.41□□□□□ -0.74
PTPRM-210ENST00000578916 ANGPT1Q15389 498 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 UBE2SQ16763 222 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 ATAT1Q5SQI0 421 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 LRRC55Q6ZSA7 311 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 PLEKHM2Q8IWE5 1019 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 KIAA0319LQ8IZA0 1049 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 LRRC43Q8N309 656 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 TMEM40Q8WWA1 233 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 CASD1Q96PB1 797 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 PPP1R16BQ96T49 567 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 LZTS2Q9BRK4 669 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 ZMYND15Q9H091 742 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 OSBPL3Q9H4L5 887 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 KCNH7Q9NS40 1196 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 PCDHA6Q9UN73 950 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 PCDHA8Q9Y5H6 950 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 U3KPZ7 1027 aaPredicted RBP10.41□□□□□ -0.74
PTPRM-210ENST00000578916 VPS13AQ96RL7 3174 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 DMDP11532 3685 aa10.41□□□□□ -0.74
PTPRM-210ENST00000578916 NFASCO94856 1347 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 C2orf71A6NGG8 1288 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 BACH1O14867 736 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 CXCL14O95715 111 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 ZSCAN20P17040 1043 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-210ENST00000578916 AOC1P19801 751 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 SMARCA1P28370 1054 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 GNAQP50148 359 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 KIZQ2M2Z5 673 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 ZNF484Q5JVG2 852 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 FAM160B1Q5W0V3 765 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 DIEXFQ68CQ4 756 aaKnown RBP10.4□□□□□ -0.74
PTPRM-210ENST00000578916 CWF19L1Q69YN2 538 aaKnown RBP10.4□□□□□ -0.74
PTPRM-210ENST00000578916 KIAA1841Q6NSI8 718 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 DGLUCYQ7Z3D6 616 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 FAM228AQ86W67 206 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 CCDC105Q8IYK2 499 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 C12orf76Q8N812 135 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-210ENST00000578916 NCOA7Q8NI08 942 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 MAP3K14Q99558 947 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 OSMRQ99650 979 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 ARID3AQ99856 593 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 RTP3Q9BQQ7 232 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 MXRA8Q9BRK3 442 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 CYP26B1Q9NR63 512 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 DZANK1Q9NVP4 752 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 USTQ9Y2C2 406 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 DCHS1Q96JQ0 3298 aa10.4□□□□□ -0.74
PTPRM-210ENST00000578916 RIF1Q5UIP0 2472 aaKnown RBP10.39□□□□□ -0.75
PTPRM-210ENST00000578916 PI15O43692 258 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 DDAH1O94760 285 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 EOMESO95936 686 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 CYP21A2P08686 494 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 DSC3Q14574 896 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 CHD1LQ86WJ1 897 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 ZNF654Q8IZM8 581 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 DTWD2Q8NBA8 298 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 RNF169Q8NCN4 708 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 IGDCC4Q8TDY8 1250 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 ACSF2Q96CM8 615 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-210ENST00000578916 RMDN1Q96DB5 314 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 MYL10Q9BUA6 226 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 IL25Q9H293 177 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 SEMA4AQ9H3S1 761 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 RNF19AQ9NV58 838 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 FBXL21Q9UKT6 434 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 CACNA1AO00555 2505 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 COL1A2P08123 1366 aa10.39□□□□□ -0.75
PTPRM-210ENST00000578916 FAM186AA6NE01 2351 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 BAZ2BQ9UIF8 2168 aaKnown RBP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 MED19A0JLT2 244 aaPredicted RBP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 E7EWF7 191 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 DDX39AO00148 427 aaKnown RBP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 STK25O00506 426 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 ATG7O95352 703 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 PLEKHA8P1O95397 391 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 LMNAP02545 664 aaKnown RBP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 VTNP04004 478 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 ARP10275 920 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 NPR3P17342 541 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 ALDH7A1P49419 539 aaKnown RBP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 METAP2P50579 478 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 ITGB3BPQ13352 177 aaPredicted RBP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 TDGQ13569 410 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 KANK3Q6NY19 840 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 PDXDC2PQ6P474 469 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 OTOP3Q7RTS5 596 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 ECHDC2Q86YB7 292 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 KIAA2013Q8IYS2 634 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 CMTR1Q8N1G2 835 aaKnown RBP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 SLC39A11Q8N1S5 342 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 SRBD1Q8N5C6 995 aaKnown RBP10.38□□□□□ -0.75
PTPRM-210ENST00000578916 METTL13Q8N6R0 699 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 CYP2W1Q8TAV3 490 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 TMEM169Q96HH4 297 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 AGO4Q9HCK5 861 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms