RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 RUSC1Q9BVN2 902 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 USP25Q9UHP3 1055 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 NOD1Q9Y239 953 aa13.5□□□□□ -0.25
IFT20-207ENST00000578547 NPHP3-ACAD11A0A0J9YXS1 232 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 C22orf31O95567 290 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 MBD3O95983 291 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 GNAT1P11488 350 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 CYP11B2P19099 503 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 PTMSP20962 102 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 RFC5P40937 340 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 RTP1P59025 263 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 PTPN11Q06124 597 aaPredicted RBP13.49□□□□□ -0.25
IFT20-207ENST00000578547 NFKBIBQ15653 356 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 TRIM60Q495X7 471 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 MARCH8Q5T0T0 291 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 MTHFD1LQ6UB35 978 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 SESTD1Q86VW0 696 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 PAGE5Q96GU1 130 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 CEP89Q96ST8 783 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 MTRQ99707 1265 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 SEZ6LQ9BYH1 1024 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 FAM49AQ9H0Q0 323 aaPredicted RBP13.49□□□□□ -0.25
IFT20-207ENST00000578547 TRPV6Q9H1D0 765 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 TNMDQ9H2S6 317 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 SUGCTQ9HAC7 445 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 MAGEF1Q9HAY2 307 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 ATP6V0A4Q9HBG4 840 aa13.49□□□□□ -0.25
IFT20-207ENST00000578547 TRMT13Q9NUP7 481 aaKnown RBP13.49□□□□□ -0.25
IFT20-207ENST00000578547 MYMKA6NI61 221 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 TREHO43280 583 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 PQBP1O60828 265 aaKnown RBP13.48□□□□□ -0.25
IFT20-207ENST00000578547 DGAT1O75907 488 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 PRR29P0C7W0 189 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 CYP2C9P11712 490 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 KCNA4P22459 653 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 CASP1P29466 404 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 HOXC8P31273 242 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 CLCN3P51790 818 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 ADAM17P78536 824 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 TLE2Q04725 743 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 PTGISQ16647 500 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 ARSHQ5FYA8 562 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 FAM102BQ5T8I3 360 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 RINT1Q6NUQ1 792 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 EFCAB12Q6NXP0 572 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 RUFY4Q6ZNE9 571 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 ANKRD33Q7Z3H0 272 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 FAM126BQ8IXS8 530 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 RETREG2Q8NC44 543 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 TMEM143Q96AN5 459 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 CTAGE1Q96RT6 745 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 BLZF1Q9H2G9 400 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 ZHX3Q9H4I2 956 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 DHX33Q9H6R0 707 aaKnown RBP13.48□□□□□ -0.25
IFT20-207ENST00000578547 POLD4Q9HCU8 107 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 GPRC5CQ9NQ84 441 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 KBTBD4Q9NVX7 518 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 ATP11BQ9Y2G3 1177 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 PPME1Q9Y570 386 aa13.48□□□□□ -0.25
IFT20-207ENST00000578547 MBLAC1A4D2B0 266 aaPredicted RBP13.47□□□□□ -0.25
IFT20-207ENST00000578547 MAGEB2O15479 319 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 B4GALT4O60513 344 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 HIP1RO75146 1068 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 TBCAO75347 108 aaKnown RBP13.47□□□□□ -0.25
IFT20-207ENST00000578547 MAFO75444 373 aaPredicted RBP13.47□□□□□ -0.25
IFT20-207ENST00000578547 CD4P01730 458 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 ASIC1P78348 528 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 AMPD3Q01432 767 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 CAMK4Q16566 473 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 KANK3Q6NY19 840 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 C1orf186Q6ZWK4 172 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 MCPH1Q8NEM0 835 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 DDX12PQ92771 950 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 TOX2Q96NM4 488 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 JPH2Q9BR39 696 aaPredicted RBP13.47□□□□□ -0.25
IFT20-207ENST00000578547 REEP2Q9BRK0 252 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 LRRC27Q9C0I9 530 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 POLR3FQ9H1D9 316 aaPredicted RBP13.47□□□□□ -0.25
IFT20-207ENST00000578547 XPNPEP1Q9NQW7 623 aa13.47□□□□□ -0.25
IFT20-207ENST00000578547 KAT6AQ92794 2004 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 DCDC2CA8MYV0 355 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 RSPH10B2B2RC85 870 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 TLR3O15455 904 aaKnown RBP13.46□□□□□ -0.25
IFT20-207ENST00000578547 RSPH10BP0C881 870 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 IDEP14735 1019 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 GUCY2CP25092 1073 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 TMOD1P28289 359 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 DNM2P50570 870 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 DRP2Q13474 957 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 PNOCQ13519 176 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 CUL4BQ13620 913 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 POSTNQ15063 836 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 EXOC8Q8IYI6 725 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 ERCC4Q92889 916 aaPredicted RBP13.46□□□□□ -0.25
IFT20-207ENST00000578547 TIGD1Q96MW7 591 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 MAP7D2Q96T17 732 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 PPP1R16BQ96T49 567 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 TRIM9Q9C026 710 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms