RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 ZNF689Q96CS4 500 aaPredicted RBP25.83■■□□□ 1.73
VAPA-205ENST00000578314 ASB2Q96Q27 587 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 CEP89Q96ST8 783 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 COL4A6Q14031 1691 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 PSMC5P62195 406 aa25.82■■□□□ 1.72
VAPA-205ENST00000578314 MRPS5P82675 430 aaKnown RBP25.82■■□□□ 1.72
VAPA-205ENST00000578314 NFX1Q12986 1120 aaKnown RBP25.82■■□□□ 1.72
VAPA-205ENST00000578314 CCDC83Q8IWF9 413 aa25.82■■□□□ 1.72
VAPA-205ENST00000578314 FBXO22Q8NEZ5 403 aa25.82■■□□□ 1.72
VAPA-205ENST00000578314 MAP7D2Q96T17 732 aa25.82■■□□□ 1.72
VAPA-205ENST00000578314 ST3GAL5Q9UNP4 418 aa25.82■■□□□ 1.72
VAPA-205ENST00000578314 COL4A4P53420 1690 aaPredicted RBP25.82■■□□□ 1.72
VAPA-205ENST00000578314 GPR182O15218 404 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 DGKIO75912 1065 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 TBC1D8BQ0IIM8 1120 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 EPC2Q52LR7 807 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 POTEDQ86YR6 584 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 SLFN12Q8IYM2 578 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 LRRC71Q8N4P6 559 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 OSMRQ99650 979 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 ADAMTS10Q9H324 1103 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 SH2B1Q9NRF2 756 aaPredicted RBP25.81■■□□□ 1.72
VAPA-205ENST00000578314 XIRP2A4UGR9 3374 aa25.81■■□□□ 1.72
VAPA-205ENST00000578314 PRRC2BQ5JSZ5 2229 aaKnown RBP25.81■■□□□ 1.72
VAPA-205ENST00000578314 NLRP11P59045 1033 aaKnown RBP25.8■■□□□ 1.72
VAPA-205ENST00000578314 NPAS4Q8IUM7 802 aa25.8■■□□□ 1.72
VAPA-205ENST00000578314 TMEM192Q8IY95 271 aa25.8■■□□□ 1.72
VAPA-205ENST00000578314 FIBCD1Q8N539 461 aa25.8■■□□□ 1.72
VAPA-205ENST00000578314 BANK1Q8NDB2 785 aa25.8■■□□□ 1.72
VAPA-205ENST00000578314 PPP1R16BQ96T49 567 aa25.8■■□□□ 1.72
VAPA-205ENST00000578314 SEPT9Q9UHD8 586 aaPredicted RBP25.8■■□□□ 1.72
VAPA-205ENST00000578314 AKT3Q9Y243 479 aa25.8■■□□□ 1.72
VAPA-205ENST00000578314 MYH9P35579 1960 aaKnown RBP25.8■■□□□ 1.72
VAPA-205ENST00000578314 IGKV6-21A0A0C4DH24 114 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 DDX11L8A8MPP1 907 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 MARCH6O60337 910 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 MGEA5O60502 916 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 BAG4O95429 457 aaKnown RBP25.79■■□□□ 1.72
VAPA-205ENST00000578314 P4HBP07237 508 aaKnown RBP25.79■■□□□ 1.72
VAPA-205ENST00000578314 QARSP47897 775 aaKnown RBP25.79■■□□□ 1.72
VAPA-205ENST00000578314 FOSBP53539 338 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 EPHA7Q15375 998 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 ANO5Q75V66 913 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 FAM228AQ86W67 206 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 RGS18Q9NS28 235 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 ADGRA3Q8IWK6 1321 aa25.79■■□□□ 1.72
VAPA-205ENST00000578314 TMEM150BA6NC51 233 aa25.78■■□□□ 1.72
VAPA-205ENST00000578314 DKC1O60832 514 aaKnown RBP eCLIP25.78■■□□□ 1.72
VAPA-205ENST00000578314 LINC00271P0C7V0 271 aa25.78■■□□□ 1.72
VAPA-205ENST00000578314 STAG3L1P0CL83 205 aa25.78■■□□□ 1.72
VAPA-205ENST00000578314 SPIRE1Q08AE8 756 aa25.78■■□□□ 1.72
VAPA-205ENST00000578314 SKIV2LQ15477 1246 aaKnown RBP25.78■■□□□ 1.72
VAPA-205ENST00000578314 MTERF2Q49AM1 385 aa25.78■■□□□ 1.72
VAPA-205ENST00000578314 CLP1Q92989 425 aaKnown RBP25.78■■□□□ 1.72
VAPA-205ENST00000578314 MUC3AQ02505 3323 aa25.78■■□□□ 1.72
VAPA-205ENST00000578314 TTC3P53804 2025 aa25.78■■□□□ 1.72
VAPA-205ENST00000578314 H3BNC9 293 aa25.77■■□□□ 1.72
VAPA-205ENST00000578314 EIF4BP23588 611 aaKnown RBP25.77■■□□□ 1.72
VAPA-205ENST00000578314 SARSP49591 514 aaKnown RBP25.77■■□□□ 1.72
VAPA-205ENST00000578314 GPC3P51654 580 aa25.77■■□□□ 1.72
VAPA-205ENST00000578314 HMGN5P82970 282 aaKnown RBP25.77■■□□□ 1.72
VAPA-205ENST00000578314 CDC42EP1Q00587 391 aa25.77■■□□□ 1.72
VAPA-205ENST00000578314 RABEP1Q15276 862 aa25.77■■□□□ 1.72
VAPA-205ENST00000578314 SAFBQ15424 915 aaKnown RBP eCLIP25.77■■□□□ 1.72
VAPA-205ENST00000578314 IL27Q8NEV9 243 aa25.77■■□□□ 1.72
VAPA-205ENST00000578314 C8orf76Q96K31 380 aa25.77■■□□□ 1.72
VAPA-205ENST00000578314 ADAM2Q99965 735 aa25.77■■□□□ 1.72
VAPA-205ENST00000578314 C1orf112Q9NSG2 853 aa25.77■■□□□ 1.72
VAPA-205ENST00000578314 C5orf67F2Z3F1 127 aa25.76■■□□□ 1.71
VAPA-205ENST00000578314 MAFO75444 373 aaPredicted RBP25.76■■□□□ 1.71
VAPA-205ENST00000578314 BMPR1AP36894 532 aa25.76■■□□□ 1.71
VAPA-205ENST00000578314 BTG3Q14201 252 aaPredicted RBP25.76■■□□□ 1.71
VAPA-205ENST00000578314 SLC24A5Q71RS6 500 aa25.76■■□□□ 1.71
VAPA-205ENST00000578314 SH2D3AQ9BRG2 576 aa25.76■■□□□ 1.71
VAPA-205ENST00000578314 WRAP73Q9P2S5 460 aaPredicted RBP25.76■■□□□ 1.71
VAPA-205ENST00000578314 RWDD3Q9Y3V2 267 aa25.76■■□□□ 1.71
VAPA-205ENST00000578314 DENND3A2RUS2 1198 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 C9IYK1 514 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 WNT7AO00755 349 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 RB1P06400 928 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 DNM2P50570 870 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 FAM189BP81408 668 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 GUCY1B3Q02153 619 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 DRP2Q13474 957 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 GPM6BQ13491 265 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 DSC3Q14574 896 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 C4orf19Q8IY42 314 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 CMTR2Q8IYT2 770 aaKnown RBP25.75■■□□□ 1.71
VAPA-205ENST00000578314 FBXO18Q8NFZ0 1043 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 ADAMTS19Q8TE59 1207 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 MTMR9Q96QG7 549 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 RNF216Q9NWF9 866 aaPredicted RBP25.75■■□□□ 1.71
VAPA-205ENST00000578314 PCDHA12Q9UN75 941 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 PPME1Q9Y570 386 aa25.75■■□□□ 1.71
VAPA-205ENST00000578314 TNFRSF10AO00220 468 aa25.74■■□□□ 1.71
VAPA-205ENST00000578314 DARSP14868 501 aaKnown RBP25.74■■□□□ 1.71
VAPA-205ENST00000578314 TFF2Q03403 129 aa25.74■■□□□ 1.71
VAPA-205ENST00000578314 CALCRLQ16602 461 aa25.74■■□□□ 1.71
VAPA-205ENST00000578314 NCAPH2Q6IBW4 605 aa25.74■■□□□ 1.71
VAPA-205ENST00000578314 MRPL38Q96DV4 380 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms