RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ELAC1Q9H777 363 aaKnown RBP18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 CYP26B1Q9NR63 512 aa18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 SEC63Q9UGP8 760 aaKnown RBP18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 FBXL21Q9UKT6 434 aa18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 FAM228AQ86W67 206 aa18.6■□□□□ 0.57
CTDNEP1-211ENST00000575783 SIX5Q8N196 739 aa18.6■□□□□ 0.57
CTDNEP1-211ENST00000575783 LRRC43Q8N309 656 aa18.6■□□□□ 0.57
CTDNEP1-211ENST00000575783 RNF169Q8NCN4 708 aa18.6■□□□□ 0.57
CTDNEP1-211ENST00000575783 OSMRQ99650 979 aa18.6■□□□□ 0.57
CTDNEP1-211ENST00000575783 RTP3Q9BQQ7 232 aa18.6■□□□□ 0.57
CTDNEP1-211ENST00000575783 SDF4Q9BRK5 362 aa18.6■□□□□ 0.57
CTDNEP1-211ENST00000575783 KCNH7Q9NS40 1196 aa18.6■□□□□ 0.57
CTDNEP1-211ENST00000575783 USTQ9Y2C2 406 aa18.6■□□□□ 0.57
CTDNEP1-211ENST00000575783 SPDYE3A6NKU9 549 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 HIP1O00291 1037 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 HOXA2O43364 376 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 KRT37O76014 449 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 EOMESO95936 686 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 KIAA1841Q6NSI8 718 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 ACSF2Q96CM8 615 aaPredicted RBP18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 HINFPQ9BQA5 517 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 PCDHA6Q9UN73 950 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 PCDHA8Q9Y5H6 950 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 R4GN57 208 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 MYO10Q9HD67 2058 aa18.59■□□□□ 0.57
CTDNEP1-211ENST00000575783 NT5C1B-RDH14C9J2C7 533 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 BACH1O14867 736 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 EPCAMP16422 314 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 CRYBB1P53674 252 aaPredicted RBP18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 TDGQ13569 410 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 BMS1Q14692 1282 aaKnown RBP18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 B4GALNT3Q6L9W6 998 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 TMC5Q6UXY8 1006 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 CYP2W1Q8TAV3 490 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 AUTS2Q8WXX7 1259 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 MYL10Q9BUA6 226 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 SPZ1Q9BXG8 430 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 RNF19AQ9NV58 838 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 DZANK1Q9NVP4 752 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 NCOR2Q9Y618 2525 aa18.58■□□□□ 0.56
CTDNEP1-211ENST00000575783 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 HBP1O60381 514 aa18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 VTNP04004 478 aa18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 METAP2P50579 478 aaKnown RBP eCLIP18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 DSC3Q14574 896 aa18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 PUM1Q14671 1186 aaKnown RBP eCLIP18.57■□□□□ 0.566e-18■■□□□ 12.7
CTDNEP1-211ENST00000575783 RALYLQ86SE5 291 aaKnown RBP18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 SLC39A11Q8N1S5 342 aa18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 CTCFLQ8NI51 663 aaPredicted RBP18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 FEZF2Q8TBJ5 459 aa18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 MXRA8Q9BRK3 442 aa18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 SEMA4AQ9H3S1 761 aa18.57■□□□□ 0.56
CTDNEP1-211ENST00000575783 LAMA4Q16363 1823 aa18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 ZSCAN20P17040 1043 aaPredicted RBP18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 ALDH7A1P49419 539 aaKnown RBP18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 SLC26A2P50443 739 aa18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 HDAC1Q13547 482 aaPredicted RBP18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 CABP7Q86V35 215 aa18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 PLEKHM2Q8IWE5 1019 aa18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 VPS52Q8N1B4 723 aa18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 CMTR1Q8N1G2 835 aaKnown RBP18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 METTL13Q8N6R0 699 aa18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 RIN2Q8WYP3 895 aaPredicted RBP18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 IL25Q9H293 177 aa18.56■□□□□ 0.56
CTDNEP1-211ENST00000575783 EPG5Q9HCE0 2579 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 NFASCO94856 1347 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 FNDC1Q4ZHG4 1894 aaPredicted RBP18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 hCG_1642624A0A1W2PR95 340 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 SPDYE4A6NLX3 237 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 DDX39AO00148 427 aaKnown RBP18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 RFX1P22670 979 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 KIF5BP33176 963 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 ITGB3BPQ13352 177 aaPredicted RBP18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 ZNF484Q5JVG2 852 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 CLLU1OSQ5K130 101 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 OTOP3Q7RTS5 596 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 TRMT1LQ7Z2T5 733 aaKnown RBP18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 ECHDC2Q86YB7 292 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 TMEM169Q96HH4 297 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 CNTNAP3BQ96NU0 1288 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 CNTNAP3Q9BZ76 1288 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 KCNK12Q9HB15 430 aa18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
CTDNEP1-211ENST00000575783 GPR32O75388 356 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 ATG7O95352 703 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 PLEKHA8P1O95397 391 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 CYP21A2P08686 494 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 BCAR1P56945 870 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 FAM160B1Q5W0V3 765 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 PDXDC2PQ6P474 469 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 CCDC149Q6ZUS6 474 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 SRBD1Q8N5C6 995 aaKnown RBP18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 HELQQ8TDG4 1101 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 LZTS2Q9BRK4 669 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 AGO4Q9HCK5 861 aaKnown RBP18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 DUSP12Q9UNI6 340 aa18.54■□□□□ 0.56
CTDNEP1-211ENST00000575783 ZFHX4Q86UP3 3567 aa18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 NARSO43776 548 aaKnown RBP18.53■□□□□ 0.56
CTDNEP1-211ENST00000575783 CFHP08603 1231 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms