RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SH2B2O14492 632 aaPredicted RBP11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 PRC1O43663 620 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 GPR32O75388 356 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 BRD1O95696 1058 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 CALM1P0DP23 149 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 CALM2P0DP24 149 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 CALM3P0DP25 149 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 RXRAP19793 462 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 ATP4AP20648 1035 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 NBL1P41271 181 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 LIFRP42702 1097 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 COL9A3Q14050 684 aaPredicted RBP11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 ZNF484Q5JVG2 852 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 LLGL2Q6P1M3 1020 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 CASC1Q6TDU7 716 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 KCNT2Q6UVM3 1135 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 ZBTB33Q86T24 672 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 FAM228AQ86W67 206 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 TEX2Q8IWB9 1127 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 CCDC82Q8N4S0 544 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 TMEM105Q8N8V8 129 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 MRPL43Q8N983 215 aaKnown RBP11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 TMEM87BQ96K49 555 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 TMEM117Q9H0C3 514 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 ADAM7Q9H2U9 754 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 RNF19AQ9NV58 838 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 CDH22Q9UJ99 828 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 SORCS3Q9UPU3 1222 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 COL1A2P08123 1366 aa11.37□□□□□ -0.59
CALCOCO2-227ENST00000575560 PLXNA3P51805 1871 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 C2CD4DB7Z1M9 353 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 DHX15O43143 795 aaKnown RBP11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 FOSP01100 380 aaPredicted RBP11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 SP100P23497 879 aaPredicted RBP11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 MCM5P33992 734 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 KRT17Q04695 432 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 ITIH3Q06033 890 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 MTMR3Q13615 1198 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 KIZQ2M2Z5 673 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 TPRNQ4KMQ1 711 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 TYW1BQ6NUM6 668 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 NFXL1Q6ZNB6 911 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 TMTC3Q6ZXV5 915 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 TMC7Q7Z402 723 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 HEATR3Q7Z4Q2 680 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 CCDC60Q8IWA6 550 aaPredicted RBP11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 FANCBQ8NB91 859 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 CASP10Q92851 521 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 NECTIN4Q96NY8 510 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 POMKQ9H5K3 350 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 RIC8AQ9NPQ8 531 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 ENTPD7Q9NQZ7 604 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 RBM8AQ9Y5S9 174 aaKnown RBP11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 HCFC2Q9Y5Z7 792 aa11.36□□□□□ -0.59
CALCOCO2-227ENST00000575560 PRR23AA6NEV1 266 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 C2orf71A6NGG8 1288 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 HOXA2O43364 376 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 C22orf31O95567 290 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 PPM1AP35813 382 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 PBX3P40426 434 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 FAM160B1Q5W0V3 765 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 WWC2Q6AWC2 1192 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 CES5AQ6NT32 575 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 SWSAP1Q6NVH7 229 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 NIPA1Q7RTP0 329 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 PGBD1Q96JS3 809 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 ZNF558Q96NG5 402 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 OSMRQ99650 979 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 SMOC2Q9H3U7 446 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 ZNF302Q9NR11 478 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 TSHZ2Q9NRE2 1034 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 SPG21Q9NZD8 308 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 DMXL1Q9Y485 3027 aa11.35□□□□□ -0.59
CALCOCO2-227ENST00000575560 MYO10Q9HD67 2058 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 FAM86B1E9PN63 330 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 BACH1O14867 736 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 CLASP2O75122 1294 aaKnown RBP11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 VTNP04004 478 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 FAM86B2P0C5J1 330 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 SREBF1P36956 1147 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 CLK2P49760 499 aaKnown RBP11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 CLCN5P51795 746 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 FUT2Q10981 343 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 SMC1AQ14683 1233 aaKnown RBP11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 SGMS1Q86VZ5 419 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 ECHDC2Q86YB7 292 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 RAB11FIP4Q86YS3 637 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 ZDHHC14Q8IZN3 488 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 SLC39A11Q8N1S5 342 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 LRRC43Q8N309 656 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 PPP1R16BQ96T49 567 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 ANO3Q9BYT9 981 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 ADAMTS10Q9H324 1103 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms