RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SUGCTQ9HAC7 445 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 PADI3Q9ULW8 664 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 PCDHA12Q9UN75 941 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 CEP131Q9UPN4 1083 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 NOC2LQ9Y3T9 749 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 CDH23Q9H251 3354 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 KDM3AQ9Y4C1 1321 aa11.5□□□□□ -0.57
GTF3C1-213ENST00000571886 IGKV6-21A0A0C4DH24 114 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 POTEMA6NI47 508 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 MAGEB2O15479 319 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 MGEA5O60502 916 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 EFCAB14O75071 495 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 AMHP03971 560 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 MCM2P49736 904 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 NLRP11P59045 1033 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 CUL4AQ13619 759 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 TTC38Q5R3I4 469 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 NOSTRINQ8IVI9 506 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 APBB2Q92870 758 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 EIF2AK1Q9BQI3 630 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 ZBED2Q9BTP6 218 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 ERVK-5Q9HDB9 667 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 PCDHB6Q9Y5E3 794 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 SQORQ9Y6N5 450 aa11.49□□□□□ -0.57
GTF3C1-213ENST00000571886 M0QZ92 97 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 CSDE1O75534 798 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 FGFR4P22455 802 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 TECP42680 631 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 CRYBB1P53674 252 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 HTRA4P83105 476 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 TBC1D8BQ0IIM8 1120 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 NFX1Q12986 1120 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 FAM228AQ86W67 206 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 TPH2Q8IWU9 490 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 C4orf19Q8IY42 314 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 RAD9AQ99638 391 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 HSD17B14Q9BPX1 270 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 LXNQ9BS40 222 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 CYP26B1Q9NR63 512 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 BMP2KQ9NSY1 1161 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 ST3GAL5Q9UNP4 418 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 AKT3Q9Y243 479 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 ARID2Q68CP9 1835 aa11.48□□□□□ -0.57
GTF3C1-213ENST00000571886 COL4A6Q14031 1691 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 LINC01553A4QN01 128 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 MAFO75444 373 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 SPATA31C1P0DKV0 1188 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 FOSL2P15408 326 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 YWHABP31946 246 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 GPC3P51654 580 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 PAK2Q13177 524 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 GNL2Q13823 731 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 IL17AQ16552 155 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 MCTP1Q6DN14 999 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 KSR1Q8IVT5 923 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 CRIPAKQ8N1N5 446 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 USP38Q8NB14 1042 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 IL27Q8NEV9 243 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 ARNTL2Q8WYA1 636 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 CEP170P1Q96L14 293 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 SMC3Q9UQE7 1217 aa11.47□□□□□ -0.57
GTF3C1-213ENST00000571886 A0A087WZ62 844 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 LPXNO60711 386 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 MED24O75448 989 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 RPS6KA5O75582 802 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 OR52Z1P0C646 297 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 TMOD1P28289 359 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 GATMP50440 423 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 DSC3Q14574 896 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 ECM1Q16610 540 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 MAFAQ8NHW3 353 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 PIGOQ8TEQ8 1089 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 TMEM143Q96AN5 459 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 FDXACB1Q9BRP7 624 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 C17orf80Q9BSJ5 609 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 TSPYL2Q9H2G4 693 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 DHX33Q9H6R0 707 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 ZSWIM4Q9H7M6 989 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 FOXD4L1Q9NU39 408 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 CHD7Q9P2D1 2997 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 MTUS1Q9ULD2 1270 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 INSL6Q9Y581 213 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 TRANK1O15050 2925 aa11.46□□□□□ -0.57
GTF3C1-213ENST00000571886 NLRC5Q86WI3 1866 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 LINC00271P0C7V0 271 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 IBSPP21815 317 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 IGFBP4P22692 258 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 TRAPPC10P48553 1259 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 ERVK-21P61565 698 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 PTGDRQ13258 359 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 XKR9Q5GH70 373 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 LARP1BQ659C4 914 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 CATSPER3Q86XQ3 398 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 RHPN2Q8IUC4 686 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 PPM1EQ8WY54 764 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 ZNF689Q96CS4 500 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 MAP7D2Q96T17 732 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms