RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 NEMFO60524 1076 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 PSMC5P62195 406 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 SPIRE1Q08AE8 756 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 TBC1D8BQ0IIM8 1120 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 TARBP2Q15633 366 aaKnown RBP16.34■□□□□ 0.21
LITAF-208ENST00000571627 CALCRLQ16602 461 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 XKR3Q5GH77 459 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 SLFN12Q8IYM2 578 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 FBXO18Q8NFZ0 1043 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 YME1L1Q96TA2 773 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 TMX1Q9H3N1 280 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 NOC2LQ9Y3T9 749 aaKnown RBP16.34■□□□□ 0.21
LITAF-208ENST00000571627 SQORQ9Y6N5 450 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
LITAF-208ENST00000571627 GPR32O75388 356 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 BAG4O95429 457 aaKnown RBP16.33■□□□□ 0.2
LITAF-208ENST00000571627 IBSPP21815 317 aaPredicted RBP16.33■□□□□ 0.2
LITAF-208ENST00000571627 QARSP47897 775 aaKnown RBP16.33■□□□□ 0.2
LITAF-208ENST00000571627 NLRP11P59045 1033 aaKnown RBP16.33■□□□□ 0.2
LITAF-208ENST00000571627 CYP4A11Q02928 519 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 NFX1Q12986 1120 aaKnown RBP16.33■□□□□ 0.2
LITAF-208ENST00000571627 DRP2Q13474 957 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 CCDC85BQ15834 202 aaPredicted RBP16.33■□□□□ 0.2
LITAF-208ENST00000571627 ANO5Q75V66 913 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 RTN4RL1Q86UN2 441 aaPredicted RBP16.33■□□□□ 0.2
LITAF-208ENST00000571627 MICALL1Q8N3F8 863 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 GDPD5Q8WTR4 605 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 CEP89Q96ST8 783 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 MAP7D2Q96T17 732 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 NIFKQ9BYG3 293 aaKnown RBP16.33■□□□□ 0.2
LITAF-208ENST00000571627 ERVK-5Q9HDB9 667 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 RGL1Q9NZL6 768 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 KIAA1671Q9BY89 1806 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 RALGAPA2Q2PPJ7 1873 aa16.33■□□□□ 0.2
LITAF-208ENST00000571627 MGEA5O60502 916 aa16.32■□□□□ 0.2
LITAF-208ENST00000571627 RPS6KA5O75582 802 aa16.32■□□□□ 0.2
LITAF-208ENST00000571627 TMOD1P28289 359 aa16.32■□□□□ 0.2
LITAF-208ENST00000571627 MCM7P33993 719 aa16.32■□□□□ 0.2
LITAF-208ENST00000571627 CRYBB1P53674 252 aaPredicted RBP16.32■□□□□ 0.2
LITAF-208ENST00000571627 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
LITAF-208ENST00000571627 SP7Q8TDD2 431 aaPredicted RBP16.32■□□□□ 0.2
LITAF-208ENST00000571627 DYDC2Q96IM9 177 aa16.32■□□□□ 0.2
LITAF-208ENST00000571627 TGS1Q96RS0 853 aaKnown RBP16.32■□□□□ 0.2
LITAF-208ENST00000571627 LXNQ9BS40 222 aa16.32■□□□□ 0.2
LITAF-208ENST00000571627 C17orf80Q9BSJ5 609 aa16.32■□□□□ 0.2
LITAF-208ENST00000571627 TMEM60Q9H2L4 133 aa16.32■□□□□ 0.2
LITAF-208ENST00000571627 LPXNO60711 386 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 P4HBP07237 508 aaKnown RBP16.31■□□□□ 0.2
LITAF-208ENST00000571627 TXKP42681 527 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 NPEPPSP55786 919 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 ERVK-21P61565 698 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 GRB10Q13322 594 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
LITAF-208ENST00000571627 CTTNQ14247 550 aaKnown RBP16.31■□□□□ 0.2
LITAF-208ENST00000571627 EPHA7Q15375 998 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 FAM228AQ86W67 206 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 NOSTRINQ8IVI9 506 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
LITAF-208ENST00000571627 MTMR9Q96QG7 549 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 FTHL17Q9BXU8 183 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 TSPYL2Q9H2G4 693 aaPredicted RBP16.31■□□□□ 0.2
LITAF-208ENST00000571627 ADAMTS10Q9H324 1103 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 FOXP1Q9H334 677 aaPredicted RBP16.31■□□□□ 0.2
LITAF-208ENST00000571627 TTC12Q9H892 705 aaPredicted RBP16.31■□□□□ 0.2
LITAF-208ENST00000571627 PRDM6Q9NQX0 595 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 PCDHA12Q9UN75 941 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 ST3GAL5Q9UNP4 418 aa16.31■□□□□ 0.2
LITAF-208ENST00000571627 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
LITAF-208ENST00000571627 POTEMA6NI47 508 aa16.3■□□□□ 0.2
LITAF-208ENST00000571627 GPC3P51654 580 aa16.3■□□□□ 0.2
LITAF-208ENST00000571627 NBR1Q14596 966 aa16.3■□□□□ 0.2
LITAF-208ENST00000571627 ZNF174Q15697 407 aa16.3■□□□□ 0.2
LITAF-208ENST00000571627 SCLT1Q96NL6 688 aa16.3■□□□□ 0.2
LITAF-208ENST00000571627 EIF2AK1Q9BQI3 630 aaKnown RBP16.3■□□□□ 0.2
LITAF-208ENST00000571627 RC3H2Q9HBD1 1191 aaKnown RBP16.3■□□□□ 0.2
LITAF-208ENST00000571627 CYP26B1Q9NR63 512 aa16.3■□□□□ 0.2
LITAF-208ENST00000571627 BMP2KQ9NSY1 1161 aaPredicted RBP16.3■□□□□ 0.2
LITAF-208ENST00000571627 MTCH2Q9Y6C9 303 aa16.3■□□□□ 0.2
LITAF-208ENST00000571627 FNDC1Q4ZHG4 1894 aaPredicted RBP16.3■□□□□ 0.2
LITAF-208ENST00000571627 ATG2AQ2TAZ0 1938 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 ADGRA3Q8IWK6 1321 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 IGKV6-21A0A0C4DH24 114 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 ZBTB39O15060 712 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 MAFO75444 373 aaPredicted RBP16.29■□□□□ 0.2
LITAF-208ENST00000571627 CSDE1O75534 798 aaKnown RBP16.29■□□□□ 0.2
LITAF-208ENST00000571627 FGFR4P22455 802 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 TPH2Q8IWU9 490 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 FBXO22Q8NEZ5 403 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 NLRP7Q8WX94 980 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 CEP170P1Q96L14 293 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 ADAM2Q99965 735 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 SMC3Q9UQE7 1217 aa16.29■□□□□ 0.2
LITAF-208ENST00000571627 DENND3A2RUS2 1198 aa16.28■□□□□ 0.2
LITAF-208ENST00000571627 GPR182O15218 404 aa16.28■□□□□ 0.2
LITAF-208ENST00000571627 GTPBP6O43824 516 aaPredicted RBP16.28■□□□□ 0.2
LITAF-208ENST00000571627 DKC1O60832 514 aaKnown RBP eCLIP16.28■□□□□ 0.2
LITAF-208ENST00000571627 EIF4BP23588 611 aaKnown RBP16.28■□□□□ 0.2
LITAF-208ENST00000571627 GJB2P29033 226 aa16.28■□□□□ 0.2
LITAF-208ENST00000571627 YWHABP31946 246 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms