RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 XBP1P17861 261 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 SCRN1Q12765 414 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 ANKRD1Q15327 319 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 EPC2Q52LR7 807 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 TRMT1LQ7Z2T5 733 aaKnown RBP13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 AIFM3Q96NN9 605 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 RIT2Q99578 217 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 TEKT3Q9BXF9 490 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 DISC1Q9NRI5 854 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 COG5Q9UP83 839 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 ADGRA3Q8IWK6 1321 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 STK36Q9NRP7 1315 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 MUC3AQ02505 3323 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 COL4A4P53420 1690 aaPredicted RBP13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 ZBTB42B2RXF5 422 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 ENPP3O14638 875 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 CHMP2AO43633 222 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 C22orf31O95567 290 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 ATP4AP20648 1035 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 SFNP31947 248 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 JAK3P52333 1124 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 TFF2Q03403 129 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 NONOQ15233 471 aaKnown RBP eCLIP13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 PTPROQ16827 1216 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 KRT25Q7Z3Z0 450 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 FIBCD1Q8N539 461 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 SPRYD3Q8NCJ5 442 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 ADAMTS19Q8TE59 1207 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 SLC5A5Q92911 643 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 TPCN1Q9ULQ1 816 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 PADI3Q9ULW8 664 aa13.96□□□□□ -0.17
CTDNEP1-205ENST00000570828 M0R2N6 131 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 PFKFB2O60825 505 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 TDP2O95551 362 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 OATP04181 439 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 CTNNB1P35222 781 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 PRKCEQ02156 737 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 NFX1Q12986 1120 aaKnown RBP13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 TMEM266Q2M3C6 531 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 Q4G0T1 1027 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 MOXD1Q6UVY6 613 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 TMEM192Q8IY95 271 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 KIAA0319LQ8IZA0 1049 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 LINC01599Q8WXQ3 324 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 HLA-CQ95604 372 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 UNC45AQ9H3U1 944 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 KCNJ14Q9UNX9 436 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 RWDD3Q9Y3V2 267 aa13.95□□□□□ -0.18
CTDNEP1-205ENST00000570828 CYP3A7-CYP3A51PA0A087WV96 503 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 CCDC194A0A1B0GVG4 234 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 H3BNC9 293 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 MAGEB2O15479 319 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 EDIL3O43854 480 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 RPS6KA5O75582 802 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 STAG3L1P0CL83 205 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 CYP3A7P24462 503 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 AK2P54819 239 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 GPM6BQ13491 265 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 BTG3Q14201 252 aaPredicted RBP13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 NPY5RQ15761 445 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 INF2Q27J81 1249 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 KIZQ2M2Z5 673 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 TIGD5Q53EQ6 642 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 ODR4Q5SWX8 454 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 DMRTA1Q5VZB9 504 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 MIER3Q7Z3K6 550 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 NPAS4Q8IUM7 802 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 RDM1Q8NG50 284 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 WASF1Q92558 559 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 GJA10Q969M2 543 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 MRPL38Q96DV4 380 aaKnown RBP13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 MAP7D2Q96T17 732 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 PPP1R16BQ96T49 567 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 UHRF1Q96T88 793 aaPredicted RBP13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 PHF20Q9BVI0 1012 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 RC3H2Q9HBD1 1191 aaKnown RBP13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 NRBP2Q9NSY0 501 aa13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 DDX25Q9UHL0 483 aaKnown RBP13.94□□□□□ -0.18
CTDNEP1-205ENST00000570828 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 TNFRSF10AO00220 468 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 PSMD10O75832 226 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 VTNP04004 478 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 IBSPP21815 317 aaPredicted RBP13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 TMOD1P28289 359 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 KCNQ1P51787 676 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 CLCN3P51790 818 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 UGCGQ16739 394 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 LETM2Q2VYF4 491 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 FAM43BQ6ZT52 329 aaPredicted RBP13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 KCTD12Q96CX2 325 aaKnown RBP13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 OSMRQ99650 979 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 C11orf84Q9BUA3 381 aaPredicted RBP13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 ORC3Q9UBD5 711 aaPredicted RBP13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 LRFN2Q9ULH4 789 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 AKT3Q9Y243 479 aa13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 NOC2LQ9Y3T9 749 aaKnown RBP13.93□□□□□ -0.18
CTDNEP1-205ENST00000570828 SIP14410 1827 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 DENND3A2RUS2 1198 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms