RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 NAALADL2Q58DX5 795 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 NEK8Q86SG6 692 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 P2RX5Q93086 422 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 C11orf84Q9BUA3 381 aaPredicted RBP19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 CDHR5Q9HBB8 845 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 RGS18Q9NS28 235 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 DDX25Q9UHL0 483 aaKnown RBP19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 KCNJ14Q9UNX9 436 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 NOC2LQ9Y3T9 749 aaKnown RBP19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 BDP1A6H8Y1 2624 aa19.26■□□□□ 0.67
MAP1LC3B-208ENST00000570189 CCDC194A0A1B0GVG4 234 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 STBD1O95210 358 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 FDPSP14324 419 aaKnown RBP19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 PPP2R5CQ13362 524 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 UGCGQ16739 394 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 ME3Q16798 604 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 XKR3Q5GH77 459 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 MIER3Q7Z3K6 550 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 IL27Q8NEV9 243 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 CEP89Q96ST8 783 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 MAP7D2Q96T17 732 aa19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 ORC3Q9UBD5 711 aaPredicted RBP19.25■□□□□ 0.67
MAP1LC3B-208ENST00000570189 IGKV6-21A0A0C4DH24 114 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 C9IYK1 514 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 SLC37A4O43826 429 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 FAM189BP81408 668 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 CDC42EP1Q00587 391 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 BTG3Q14201 252 aaPredicted RBP19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 EFCAB12Q6NXP0 572 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 SLC24A5Q71RS6 500 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 FAM228AQ86W67 206 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 METTL13Q8N6R0 699 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 ADAMTS10Q9H324 1103 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 ELAC1Q9H777 363 aaKnown RBP19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 ST3GAL5Q9UNP4 418 aa19.24■□□□□ 0.67
MAP1LC3B-208ENST00000570189 ARID2Q68CP9 1835 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 MYO7AQ13402 2215 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 CHMP2AO43633 222 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 MGEA5O60502 916 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 VTNP04004 478 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 CTNNB1P35222 781 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 CLCN3P51790 818 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 DSC3Q14574 896 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 KIZQ2M2Z5 673 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 TMEM266Q2M3C6 531 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 LETM2Q2VYF4 491 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 TNFRSF25Q93038 417 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 GJA10Q969M2 543 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 UHRF1Q96T88 793 aaPredicted RBP19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 OSMRQ99650 979 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 UBE2ZQ9H832 354 aaPredicted RBP19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 VAV3Q9UKW4 847 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 PPME1Q9Y570 386 aa19.23■□□□□ 0.67
MAP1LC3B-208ENST00000570189 EIF4BP23588 611 aaKnown RBP19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 KCNQ1P51787 676 aa19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 NEK4P51957 841 aa19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 PSMC5P62195 406 aa19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 TBC1D8BQ0IIM8 1120 aa19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 NFX1Q12986 1120 aaKnown RBP19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 BANK1Q8NDB2 785 aa19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 NSUN7Q8NE18 718 aaKnown RBP19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 OXER1Q8TDS5 423 aa19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 ADAM2Q99965 735 aa19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 NSUN3Q9H649 340 aaKnown RBP19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 GINS2Q9Y248 185 aa19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 PLXNA4Q9HCM2 1894 aa19.22■□□□□ 0.67
MAP1LC3B-208ENST00000570189 DENND3A2RUS2 1198 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 NCK2O43639 380 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 DKC1O60832 514 aaKnown RBP eCLIP19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 LARGE1O95461 756 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 MMP1P03956 469 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 GPC3P51654 580 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 NLRP11P59045 1033 aaKnown RBP19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 LEXMQ3ZCV2 418 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 HAS1Q92839 578 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 BRMS1Q9HCU9 246 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 GJB4Q9NTQ9 266 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 TMEM161AQ9NX61 479 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 LRFN2Q9ULH4 789 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 AKT3Q9Y243 479 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 PCDHB7Q9Y5E2 793 aa19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 MRPL42Q9Y6G3 142 aaKnown RBP19.21■□□□□ 0.67
MAP1LC3B-208ENST00000570189 MAFO75444 373 aaPredicted RBP19.2■□□□□ 0.66
MAP1LC3B-208ENST00000570189 SEC24BO95487 1268 aa19.2■□□□□ 0.66
MAP1LC3B-208ENST00000570189 KRT2P35908 639 aa19.2■□□□□ 0.66
MAP1LC3B-208ENST00000570189 PIK3AP1Q6ZUJ8 805 aa19.2■□□□□ 0.66
MAP1LC3B-208ENST00000570189 LRRC71Q8N4P6 559 aa19.2■□□□□ 0.66
MAP1LC3B-208ENST00000570189 NEK9Q8TD19 979 aa19.2■□□□□ 0.66
MAP1LC3B-208ENST00000570189 PABPC5Q96DU9 382 aaKnown RBP19.2■□□□□ 0.66
MAP1LC3B-208ENST00000570189 JPH2Q9BR39 696 aaPredicted RBP19.2■□□□□ 0.66
MAP1LC3B-208ENST00000570189 EML1O00423 815 aa19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 CCNT1O60563 726 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 DARSP14868 501 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 QARSP47897 775 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 SPIRE1Q08AE8 756 aa19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 EARS2Q5JPH6 523 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 ANO5Q75V66 913 aa19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 TRMT1LQ7Z2T5 733 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 EXOC8Q8IYI6 725 aa19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 SLFN12Q8IYM2 578 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms