RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 MRPL42Q9Y6G3 142 aaKnown RBP25.4■■□□□ 1.66
RBFOX1-219ENST00000569895 XIRP2A4UGR9 3374 aa25.4■■□□□ 1.66
RBFOX1-219ENST00000569895 CCDC194A0A1B0GVG4 234 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 GRM6O15303 877 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 ZNF862O60290 1169 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 PFKFB2O60825 505 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 TDP2O95551 362 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 IBSPP21815 317 aaPredicted RBP25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 CLCN3P51790 818 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 NLRP11P59045 1033 aaKnown RBP25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 TBC1D8BQ0IIM8 1120 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 PAN2Q504Q3 1202 aaKnown RBP25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 EP400NLQ6ZTU2 488 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 WASF1Q92558 559 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 AIFM3Q96NN9 605 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 DDX25Q9UHL0 483 aaKnown RBP25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 PLAGL2Q9UPG8 496 aa25.39■■□□□ 1.66
RBFOX1-219ENST00000569895 STK36Q9NRP7 1315 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 CDC42EP1Q00587 391 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 NPY5RQ15761 445 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 PPP2R3CQ969Q6 453 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 MBOAT7Q96N66 472 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 PHF20Q9BVI0 1012 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 AAASQ9NRG9 546 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 TPCN1Q9ULQ1 816 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 KCNJ14Q9UNX9 436 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 FAM50BQ9Y247 325 aa25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 TCF20Q9UGU0 1960 aaKnown RBP25.38■■□□□ 1.65
RBFOX1-219ENST00000569895 RALGAPA2Q2PPJ7 1873 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 MGEA5O60502 916 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 MMP1P03956 469 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 INF2Q27J81 1249 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 XKR3Q5GH77 459 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 PTCRAQ6ISU1 281 aaPredicted RBP25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 FAM228AQ86W67 206 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 LRRC71Q8N4P6 559 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 NEK9Q8TD19 979 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 GJA10Q969M2 543 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 SCLT1Q96NL6 688 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 NAP1L4Q99733 375 aaKnown RBP25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 C1QTNF1Q9BXJ1 281 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 NIFKQ9BYG3 293 aaKnown RBP25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 ATP6V0A4Q9HBG4 840 aa25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 ALG13Q9NP73 1137 aaKnown RBP25.37■■□□□ 1.65
RBFOX1-219ENST00000569895 C9IYK1 514 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 GCFC2P16383 781 aaKnown RBP25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 ZSCAN20P17040 1043 aaPredicted RBP25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 EIF4BP23588 611 aaKnown RBP25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 DNM2P50570 870 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 UGCGQ16739 394 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 LETM2Q2VYF4 491 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 SPOUT1Q5T280 376 aaKnown RBP25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 NEK8Q86SG6 692 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 LINC01465Q8N7H1 131 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 ETNPPLQ8TBG4 499 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 FAM20AQ96MK3 541 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 ADAMTS10Q9H324 1103 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 ELAC1Q9H777 363 aaKnown RBP25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 TMEM161AQ9NX61 479 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 CLDND1Q9NY35 253 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 PCDHB12Q9Y5F1 795 aa25.36■■□□□ 1.65
RBFOX1-219ENST00000569895 MYH9P35579 1960 aaKnown RBP25.35■■□□□ 1.65
RBFOX1-219ENST00000569895 TBKBP1A7MCY6 615 aa25.35■■□□□ 1.65
RBFOX1-219ENST00000569895 FAM189BP81408 668 aa25.35■■□□□ 1.65
RBFOX1-219ENST00000569895 COL19A1Q14993 1142 aa25.35■■□□□ 1.65
RBFOX1-219ENST00000569895 SEPT9Q9UHD8 586 aaPredicted RBP25.35■■□□□ 1.65
RBFOX1-219ENST00000569895 NLRC5Q86WI3 1866 aa25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 GRXCR2A6NFK2 248 aa25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 HOXA2O43364 376 aa25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 DKC1O60832 514 aaKnown RBP eCLIP25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 TARBP2Q15633 366 aaKnown RBP25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 PPP4R3AQ6IN85 833 aa25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 B3GNT9Q6UX72 402 aa25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 KLHL23Q8NBE8 558 aa25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 SPPL3Q8TCT6 385 aa25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 ORC3Q9UBD5 711 aaPredicted RBP25.34■■□□□ 1.65
RBFOX1-219ENST00000569895 H3BQ06 376 aaPredicted RBP25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 MARCH6O60337 910 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 ITGB1P05556 798 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 GATMP50440 423 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 AK2P54819 239 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 PSMC5P62195 406 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 DSC3Q14574 896 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 CSPP1Q1MSJ5 1256 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 MTERF2Q49AM1 385 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 NLRP7Q8WX94 980 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 JPH2Q9BR39 696 aaPredicted RBP25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 BRMS1Q9HCU9 246 aa25.33■■□□□ 1.65
RBFOX1-219ENST00000569895 DDX11L8A8MPP1 907 aa25.32■■□□□ 1.64
RBFOX1-219ENST00000569895 DARSP14868 501 aaKnown RBP25.32■■□□□ 1.64
RBFOX1-219ENST00000569895 GPC3P51654 580 aa25.32■■□□□ 1.64
RBFOX1-219ENST00000569895 FAM102BQ5T8I3 360 aa25.32■■□□□ 1.64
RBFOX1-219ENST00000569895 FAM178BQ8IXR5 827 aa25.32■■□□□ 1.64
RBFOX1-219ENST00000569895 POF1BQ8WVV4 589 aa25.32■■□□□ 1.64
RBFOX1-219ENST00000569895 TBX3O15119 743 aa25.31■■□□□ 1.64
RBFOX1-219ENST00000569895 SLC37A4O43826 429 aa25.31■■□□□ 1.64
RBFOX1-219ENST00000569895 CCNT1O60563 726 aaKnown RBP25.31■■□□□ 1.64
RBFOX1-219ENST00000569895 HYAL1Q12794 435 aa25.31■■□□□ 1.64
RBFOX1-219ENST00000569895 PPP2R5CQ13362 524 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms