RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 SH2D3AQ9BRG2 576 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 NKX2-4Q9H2Z4 354 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 ZNF576Q9H609 170 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 CYP26B1Q9NR63 512 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 PADI3Q9ULW8 664 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 PPME1Q9Y570 386 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 PCDHB6Q9Y5E3 794 aa12.41□□□□□ -0.42
SHCBP1-207ENST00000569702 POTEMA6NI47 508 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 ENPP3O14638 875 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 AMHP03971 560 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 SPATA31C1P0DKV0 1188 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 YWHABP31946 246 aaKnown RBP12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 TECP42680 631 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 CRYBB1P53674 252 aaPredicted RBP12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 NPEPPSP55786 919 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 PTGDRQ13258 359 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 DRP2Q13474 957 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 KIZQ2M2Z5 673 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 RILPL1Q5EBL4 403 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 PLA2G4FQ68DD2 849 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 TPH2Q8IWU9 490 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 ZNF579Q8NAF0 562 aaKnown RBP12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 TMEM40Q8WWA1 233 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 TOP1MTQ969P6 601 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 MAP7D2Q96T17 732 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 CDX2Q99626 313 aaPredicted RBP12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 RAD9AQ99638 391 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 ADAMTS10Q9H324 1103 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 SUGCTQ9HAC7 445 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 TRANK1O15050 2925 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 EYSQ5T1H1 3165 aa12.4□□□□□ -0.42
SHCBP1-207ENST00000569702 LOXHD1Q8IVV2 1947 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 LAD1O00515 517 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 ZBTB39O15060 712 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 TLL1O43897 1013 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 CA3P07451 260 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 PDCP20941 246 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 GPC3P51654 580 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 NLRP11P59045 1033 aaKnown RBP12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 HTRA4P83105 476 aaPredicted RBP12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 GRIN2CQ14957 1233 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 OTUD6AQ7L8S5 288 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 RTN4RL1Q86UN2 441 aaPredicted RBP12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 MYOCDQ8IZQ8 938 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 LINC01599Q8WXQ3 324 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 CEP170P1Q96L14 293 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 OSMRQ99650 979 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 JPH2Q9BR39 696 aaPredicted RBP12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 FTHL17Q9BXU8 183 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 TMX1Q9H3N1 280 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 DHX33Q9H6R0 707 aaKnown RBP12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 SLC28A3Q9HAS3 691 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 ERVK-5Q9HDB9 667 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 ANKEF1Q9NU02 776 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 AKT3Q9Y243 479 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 GINS2Q9Y248 185 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 MYO9BQ13459 2157 aa12.39□□□□□ -0.43
SHCBP1-207ENST00000569702 LCHNA4D1U4 455 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 ARHGEF15O94989 841 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 XRCC6P12956 609 aaKnown RBP eCLIP12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 RFC5P40937 340 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 PRPHP41219 470 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 DNM2P50570 870 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 CDC42EP1Q00587 391 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 PAK2Q13177 524 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 PDIA5Q14554 519 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 TMEM266Q2M3C6 531 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 PPP2R2DQ66LE6 453 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 EXOC8Q8IYI6 725 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 CRIPAKQ8N1N5 446 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 IGSF22Q8N9C0 903 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 SLC7A3Q8WY07 619 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 PPP1R16BQ96T49 567 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 ZBED2Q9BTP6 218 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 POLR3CQ9BUI4 534 aaPredicted RBP12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 TUFT1Q9NNX1 390 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 ST3GAL5Q9UNP4 418 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 STXBP5LQ9Y2K9 1186 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 INSL6Q9Y581 213 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 TTC3P53804 2025 aa12.38□□□□□ -0.43
SHCBP1-207ENST00000569702 PRUNE2Q8WUY3 3088 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 GPR182O15218 404 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 MED24O75448 989 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 SYT1P21579 422 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 EIF4BP23588 611 aaKnown RBP12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 RPA1P27694 616 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 TAP1Q03518 808 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 IL17AQ16552 155 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 XKR9Q5GH70 373 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 ODR4Q5SWX8 454 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 BRAPQ7Z569 592 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 FAM228AQ86W67 206 aa12.37□□□□□ -0.43
SHCBP1-207ENST00000569702 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms