RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TMEM237Q96Q45 408 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 C7orf25Q9BPX7 421 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 STK17AQ9UEE5 414 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 ARL2BPQ9Y2Y0 163 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 C6orf229H3BNL8 230 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 DRD4P21917 467 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 STAT3P40763 770 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 RNASELQ05823 741 aaKnown RBP11.76□□□□□ -0.53
PALB2-206ENST00000568219 ITIH3Q06033 890 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 HIPK4Q8NE63 616 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 CCDC127Q96BQ5 260 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 TMEM47Q9BQJ4 181 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 PCIF1Q9H4Z3 704 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 CFAP69A5D8W1 941 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 KLRC4O43908 158 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 SKIP12755 728 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 MMP14P50281 582 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 DNAJC3Q13217 504 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 PPP2R5EQ16537 467 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 ZNF571Q7Z3V5 609 aaPredicted RBP11.76□□□□□ -0.53
PALB2-206ENST00000568219 NBPF5PQ86XG9 351 aaPredicted RBP11.76□□□□□ -0.53
PALB2-206ENST00000568219 ABTB1Q969K4 478 aaPredicted RBP11.76□□□□□ -0.53
PALB2-206ENST00000568219 PABPC3Q9H361 631 aaKnown RBP11.76□□□□□ -0.53
PALB2-206ENST00000568219 ANAPC5Q9UJX4 755 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 DNAJC12Q9UKB3 198 aa11.76□□□□□ -0.53
PALB2-206ENST00000568219 PVALEFA0A1B0GWK0 134 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 ARHGAP42A6NI28 874 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 ATF2P15336 505 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 FERP16591 822 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 SEPT2Q15019 361 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 LRRC36Q1X8D7 754 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 CENPPQ6IPU0 288 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 FAM43BQ6ZT52 329 aaPredicted RBP11.75□□□□□ -0.53
PALB2-206ENST00000568219 RAD54LQ92698 747 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 NT5C3AQ9H0P0 336 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 PSTPIP2Q9H939 334 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.75□□□□□ -0.531e-6■■■□□ 14.8
PALB2-206ENST00000568219 ZFATQ9P243 1243 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 TCRBV5S4A2TA0A5A2 114 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 CSF1RP07333 972 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 KCNQ4P56696 695 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 RWDD2BP57060 319 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 KLC1Q07866 573 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 KCNMA1Q12791 1236 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 AADACL2Q6P093 401 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 TPCN2Q8NHX9 752 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 PTPRUQ92729 1446 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 POTEFA5A3E0 1075 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 DDX39AO00148 427 aaKnown RBP11.75□□□□□ -0.53
PALB2-206ENST00000568219 ATP2A1O14983 1001 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 MAPK13O15264 365 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 TRIM49P0CI25 452 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 TRIM49CP0CI26 452 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 LMNB1P20700 586 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 FIGNQ5HY92 759 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 POTEGQ6S5H5 508 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 POTEEQ6S8J3 1075 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 FAM186BQ8IYM0 893 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 RILPQ96NA2 401 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 UBE2TQ9NPD8 197 aaPredicted RBP11.75□□□□□ -0.53
PALB2-206ENST00000568219 A1CFQ9NQ94 594 aaKnown RBP11.75□□□□□ -0.53
PALB2-206ENST00000568219 BARHL2Q9NY43 387 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 TTC7AQ9ULT0 858 aaPredicted RBP11.75□□□□□ -0.53
PALB2-206ENST00000568219 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
PALB2-206ENST00000568219 MYH10P35580 1976 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 SNUPNO95149 360 aaKnown RBP11.74□□□□□ -0.53
PALB2-206ENST00000568219 ZCCHC18P0CG32 403 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 CDK17Q00537 523 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 CEP128Q6ZU80 1094 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 EPM2AIP1Q7L775 607 aaPredicted RBP11.74□□□□□ -0.53
PALB2-206ENST00000568219 PIGBQ92521 554 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 TTC1Q99614 292 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 ATP8A2Q9NTI2 1148 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.74□□□□□ -0.53
PALB2-206ENST00000568219 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
PALB2-206ENST00000568219 EXOC1LA0A1B0GW35 172 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 KRT16P08779 473 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 UBTFL6P0CB48 400 aaPredicted RBP11.74□□□□□ -0.53
PALB2-206ENST00000568219 TROVE2P10155 538 aaKnown RBP eCLIP11.74□□□□□ -0.53
PALB2-206ENST00000568219 DLATP10515 647 aaKnown RBP11.74□□□□□ -0.53
PALB2-206ENST00000568219 STRN3Q13033 797 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 DRAP1Q14919 205 aaPredicted RBP11.74□□□□□ -0.53
PALB2-206ENST00000568219 GALNT17Q6IS24 598 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 ANKRD35Q8N283 1001 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 FGD4Q96M96 766 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 CARD10Q9BWT7 1032 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 NEO1Q92859 1461 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 AGTP01019 485 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 BCRP11274 1271 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 ATF7P17544 494 aaPredicted RBP11.74□□□□□ -0.53
PALB2-206ENST00000568219 PAPOLAP51003 745 aaKnown RBP11.74□□□□□ -0.53
PALB2-206ENST00000568219 CCDC174Q6PII3 467 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 SFR1Q86XK3 245 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 KIAA0825Q8IV33 1275 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 C4orf33Q8N1A6 199 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 CCT6BQ92526 530 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
PALB2-206ENST00000568219 BHMT2Q9H2M3 363 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms