RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 E2F4Q16254 413 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 KIAA0319LQ8IZA0 1049 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 DNAJB3Q8WWF6 145 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 DPF3Q92784 378 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 BMP2KQ9NSY1 1161 aaPredicted RBP20.05■□□□□ 0.8
COMMD4-222ENST00000568034 HPSEQ9Y251 543 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 TANC1Q9C0D5 1861 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 ARHGEF35A5YM69 484 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 RBAK-RBAKDNI3L0D1 243 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 USO1O60763 962 aaKnown RBP20.04■□□□□ 0.8
COMMD4-222ENST00000568034 PLA2G4BP0C869 781 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 EMC2Q15006 297 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 EFCAB12Q6NXP0 572 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 CAGE1Q8TC20 777 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 RAD54LQ92698 747 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 RUSC1Q9BVN2 902 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 FAM49AQ9H0Q0 323 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-222ENST00000568034 WNT8AQ9H1J5 351 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 HIPK3Q9H422 1215 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 GOLPH3LQ9H4A5 285 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 PRDM5Q9NQX1 630 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-222ENST00000568034 CCDC39Q9UFE4 941 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 SIP14410 1827 aa20.04■□□□□ 0.8
COMMD4-222ENST00000568034 PITPNM1O00562 1244 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 DGAT1O75907 488 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 CKBP12277 381 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 PFKFB1P16118 471 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 POLGP54098 1239 aaPredicted RBP20.03■□□□□ 0.8
COMMD4-222ENST00000568034 MGAT3Q09327 533 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 RRAGBQ5VZM2 374 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 PADI6Q6TGC4 694 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 CCDC73Q6ZRK6 1079 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 METTL13Q8N6R0 699 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 PDILTQ8N807 584 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 SYT2Q8N9I0 419 aaPredicted RBP20.03■□□□□ 0.8
COMMD4-222ENST00000568034 RASSF8Q8NHQ8 419 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 SLC7A3Q8WY07 619 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 PANK2Q9BZ23 570 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 PPP1R12CQ9BZL4 782 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 ATP6V0A4Q9HBG4 840 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 FAM13BQ9NYF5 915 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 STK17AQ9UEE5 414 aa20.03■□□□□ 0.8
COMMD4-222ENST00000568034 ZMYND8Q9ULU4 1186 aaPredicted RBP20.03■□□□□ 0.8
COMMD4-222ENST00000568034 A0A1B0GVL5 298 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 CAND2O75155 1236 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 CYP11B2P19099 503 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 CYP2C18P33260 490 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 THPOP40225 353 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 MCM6Q14566 821 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 ZNF618Q5T7W0 954 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 RINT1Q6NUQ1 792 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 C1orf186Q6ZWK4 172 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 RETREG2Q8NC44 543 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 LARP4BQ92615 738 aaKnown RBP20.02■□□□□ 0.8
COMMD4-222ENST00000568034 CCDC43Q96MW1 224 aaKnown RBP20.02■□□□□ 0.8
COMMD4-222ENST00000568034 MTRQ99707 1265 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 SUGCTQ9HAC7 445 aa20.02■□□□□ 0.8
COMMD4-222ENST00000568034 PDE4DIPQ5VU43 2346 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 GADD45BO75293 160 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-222ENST00000568034 TIMP1P01033 207 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 CTSHP09668 335 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 SYN1P17600 705 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 STAT6P42226 847 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 BFSP2Q13515 415 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 MBTPS1Q14703 1052 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 GPNMBQ14956 572 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 ARSHQ5FYA8 562 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 FAM26DQ5JW98 314 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 CCDC155Q8N6L0 562 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 FSIP1Q8NA03 581 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 MRPS27Q92552 414 aaKnown RBP20.01■□□□□ 0.79
COMMD4-222ENST00000568034 TMEM143Q96AN5 459 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 DHX58Q96C10 678 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 JPH2Q9BR39 696 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-222ENST00000568034 GPRC5CQ9NQ84 441 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 KCNH3Q9ULD8 1083 aa20.01■□□□□ 0.79
COMMD4-222ENST00000568034 POLR2DO15514 142 aaKnown RBP20■□□□□ 0.79
COMMD4-222ENST00000568034 GAS2O43903 313 aaKnown RBP20■□□□□ 0.79
COMMD4-222ENST00000568034 GPR32O75388 356 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 CHRNA1P02708 482 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 VTNP04004 478 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 IQCF3P0C7M6 154 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 ARL2P36404 184 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 NDUFA8P51970 172 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 MRPS6P82932 125 aaKnown RBP20■□□□□ 0.79
COMMD4-222ENST00000568034 TMEM62Q0P6H9 643 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 LRRC8DQ7L1W4 858 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 EXOC8Q8IYI6 725 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 NME8Q8N427 588 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 VWCEQ96DN2 955 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 OSBPL7Q9BZF2 842 aa20■□□□□ 0.79
COMMD4-222ENST00000568034 SUCLA2Q9P2R7 463 aaPredicted RBP20■□□□□ 0.79
COMMD4-222ENST00000568034 RPLP2P05387 115 aaKnown RBP19.99■□□□□ 0.79
COMMD4-222ENST00000568034 SSBP05455 408 aaKnown RBP eCLIP19.99■□□□□ 0.79
COMMD4-222ENST00000568034 RAG1P15918 1043 aa19.99■□□□□ 0.79
COMMD4-222ENST00000568034 SELPP16109 830 aa19.99■□□□□ 0.79
COMMD4-222ENST00000568034 GUCY2CP25092 1073 aa19.99■□□□□ 0.79
COMMD4-222ENST00000568034 TMOD1P28289 359 aa19.99■□□□□ 0.79
COMMD4-222ENST00000568034 CCL23P55773 120 aa19.99■□□□□ 0.79
COMMD4-222ENST00000568034 MAPK7Q13164 816 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms