RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 PTPAQ15257 358 aa16.9■□□□□ 0.3
COMMD4-219ENST00000567399 SHHQ15465 462 aa16.9■□□□□ 0.3
COMMD4-219ENST00000567399 FAM26DQ5JW98 314 aa16.9■□□□□ 0.3
COMMD4-219ENST00000567399 ATL3Q6DD88 541 aa16.9■□□□□ 0.3
COMMD4-219ENST00000567399 CABP7Q86V35 215 aa16.9■□□□□ 0.3
COMMD4-219ENST00000567399 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
COMMD4-219ENST00000567399 TCP11Q8WWU5 503 aa16.9■□□□□ 0.3
COMMD4-219ENST00000567399 MTRQ99707 1265 aa16.9■□□□□ 0.3
COMMD4-219ENST00000567399 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.9■□□□□ 0.3
COMMD4-219ENST00000567399 CELF4Q9BZC1 486 aaKnown RBP16.9■□□□□ 0.3
COMMD4-219ENST00000567399 NT5C3AQ9H0P0 336 aa16.9■□□□□ 0.3
COMMD4-219ENST00000567399 SUCLA2Q9P2R7 463 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-219ENST00000567399 LTBP2Q14767 1821 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 SPTLC2O15270 562 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 NBNO60934 754 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 GHRP10912 638 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 TXLNAP40222 546 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 NLRP11P59045 1033 aaKnown RBP16.89■□□□□ 0.29
COMMD4-219ENST00000567399 CDC42EP1Q00587 391 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 TMEM240Q5SV17 173 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 C9orf50Q5SZB4 431 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 RHPN2Q8IUC4 686 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 KRI1Q8N9T8 703 aaKnown RBP16.89■□□□□ 0.29
COMMD4-219ENST00000567399 NLRP7Q8WX94 980 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 SEPT8Q92599 483 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 PLIN2Q99541 437 aa16.89■□□□□ 0.29
COMMD4-219ENST00000567399 DBR1Q9UK59 544 aaKnown RBP16.89■□□□□ 0.29
COMMD4-219ENST00000567399 SRPRBQ9Y5M8 271 aaKnown RBP16.89■□□□□ 0.29
COMMD4-219ENST00000567399 TNRC18O15417 2968 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-219ENST00000567399 MKI67P46013 3256 aaKnown RBP16.88■□□□□ 0.29
COMMD4-219ENST00000567399 TRIP12Q14669 1992 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-219ENST00000567399 GAS2O43903 313 aaKnown RBP16.88■□□□□ 0.29
COMMD4-219ENST00000567399 USO1O60763 962 aaKnown RBP16.88■□□□□ 0.29
COMMD4-219ENST00000567399 DGAT1O75907 488 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 NASPP49321 788 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-219ENST00000567399 RARRES1P49788 294 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 DNM1Q05193 864 aaKnown RBP16.88■□□□□ 0.29
COMMD4-219ENST00000567399 IKBKEQ14164 716 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 EMC2Q15006 297 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 KIZQ2M2Z5 673 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 CNKSR3Q6P9H4 555 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 C16orf59Q7L2K0 433 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 MAEAQ7L5Y9 396 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 ZNF710Q8N1W2 664 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 TMEM143Q96AN5 459 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 CSRNP2Q9H175 543 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 ATP6V0A4Q9HBG4 840 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 CCDC39Q9UFE4 941 aa16.88■□□□□ 0.29
COMMD4-219ENST00000567399 FBXO2Q9UK22 296 aaPredicted RBP16.88■□□□□ 0.29
COMMD4-219ENST00000567399 A0A1W2PPC1 479 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 YEATS4O95619 227 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 SSBP05455 408 aaKnown RBP eCLIP16.87■□□□□ 0.29
COMMD4-219ENST00000567399 KCNJ6P48051 423 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 CRYBB1P53674 252 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-219ENST00000567399 KRT85P78386 507 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 GRIN1Q05586 938 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 MGAT3Q09327 533 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 ECM1Q16610 540 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 SPECC1Q5M775 1068 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 ODR4Q5SWX8 454 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 TRAF7Q6Q0C0 670 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 USP38Q8NB14 1042 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 LINC00301Q8NCQ3 95 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 DBF4BQ8NFT6 615 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 PSPC1Q8WXF1 523 aaKnown RBP16.87■□□□□ 0.29
COMMD4-219ENST00000567399 ZNF668Q96K58 619 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-219ENST00000567399 CLIC6Q96NY7 704 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 OSMRQ99650 979 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 IFIH1Q9BYX4 1025 aaKnown RBP16.87■□□□□ 0.29
COMMD4-219ENST00000567399 BHMT2Q9H2M3 363 aa16.87■□□□□ 0.29
COMMD4-219ENST00000567399 DHX33Q9H6R0 707 aaKnown RBP16.87■□□□□ 0.29
COMMD4-219ENST00000567399 IGKV6-21A0A0C4DH24 114 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 E9PMD0 336 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 SLC26A4O43511 780 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 PPP6R2O75170 966 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 RPS6KA5O75582 802 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 CXCL10P02778 98 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 ME1P48163 572 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 NFX1Q12986 1120 aaKnown RBP16.86■□□□□ 0.29
COMMD4-219ENST00000567399 PAK2Q13177 524 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 DRP2Q13474 957 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 MBTPS1Q14703 1052 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 FBXO47Q5MNV8 452 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 FAM102BQ5T8I3 360 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 PADI6Q6TGC4 694 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 TSHZ1Q6ZSZ6 1077 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 KCNG4Q8TDN1 519 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 HERVK_113Q902F9 699 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 APBB2Q92870 758 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 NLRP4Q96MN2 994 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 CEP89Q96ST8 783 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 MMTAG2Q9BU76 263 aaKnown RBP16.86■□□□□ 0.29
COMMD4-219ENST00000567399 GCOM2Q9BZD3 368 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-219ENST00000567399 ZDHHC9Q9Y397 364 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 SLC4A7Q9Y6M7 1214 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 SQORQ9Y6N5 450 aa16.86■□□□□ 0.29
COMMD4-219ENST00000567399 ABHD14A-ACY1A0A1B0GW23 586 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 ASAP2O43150 1006 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 EFCAB14O75071 495 aa16.85■□□□□ 0.29
COMMD4-219ENST00000567399 GPR32O75388 356 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms