RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 DUSP12Q9UNI6 340 aa19.25■□□□□ 0.67
CDH3-205ENST00000566808 MAFGO15525 162 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 KRT37O76014 449 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 SLC26A2P50443 739 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 FAM189BP81408 668 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 TROAPQ12815 778 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 TDGQ13569 410 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 CWC27Q6UX04 472 aaKnown RBP19.24■□□□□ 0.67
CDH3-205ENST00000566808 LRRC55Q6ZSA7 311 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 ABI1Q8IZP0 508 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 PIBF1Q8WXW3 757 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 ACSF2Q96CM8 615 aaPredicted RBP19.24■□□□□ 0.67
CDH3-205ENST00000566808 CASD1Q96PB1 797 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 FBXL21Q9UKT6 434 aa19.24■□□□□ 0.67
CDH3-205ENST00000566808 COL1A2P08123 1366 aa19.23■□□□□ 0.67
CDH3-205ENST00000566808 STAT5BP51692 787 aa19.23■□□□□ 0.67
CDH3-205ENST00000566808 BMS1Q14692 1282 aaKnown RBP19.23■□□□□ 0.67
CDH3-205ENST00000566808 ZC3H14Q6PJT7 736 aaKnown RBP19.23■□□□□ 0.67
CDH3-205ENST00000566808 SIX5Q8N196 739 aa19.23■□□□□ 0.67
CDH3-205ENST00000566808 SLC39A11Q8N1S5 342 aa19.23■□□□□ 0.67
CDH3-205ENST00000566808 CYP2W1Q8TAV3 490 aa19.23■□□□□ 0.67
CDH3-205ENST00000566808 SPZ1Q9BXG8 430 aa19.23■□□□□ 0.67
CDH3-205ENST00000566808 JADE2Q9NQC1 790 aa19.23■□□□□ 0.67
CDH3-205ENST00000566808 DLL3Q9NYJ7 618 aa19.23■□□□□ 0.67
CDH3-205ENST00000566808 USP24Q9UPU5 2620 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 ERICH2A1L162 156 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 KLRC1P26715 233 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 ACTR2P61160 394 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 DSC3Q14574 896 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 CCDC149Q6ZUS6 474 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 OTOP3Q7RTS5 596 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 FAM228AQ86W67 206 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 KIAA0319LQ8IZA0 1049 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 C12orf76Q8N812 135 aaPredicted RBP19.22■□□□□ 0.67
CDH3-205ENST00000566808 RRP36Q96EU6 259 aaKnown RBP19.22■□□□□ 0.67
CDH3-205ENST00000566808 CNTNAP3BQ96NU0 1288 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 HINFPQ9BQA5 517 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 CNTNAP3Q9BZ76 1288 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 CDHR5Q9HBB8 845 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 RNF19AQ9NV58 838 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 SEC63Q9UGP8 760 aaKnown RBP19.22■□□□□ 0.67
CDH3-205ENST00000566808 MYH9P35579 1960 aaKnown RBP19.22■□□□□ 0.67
CDH3-205ENST00000566808 CFAP47Q6ZTR5 3102 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 NFASCO94856 1347 aa19.22■□□□□ 0.67
CDH3-205ENST00000566808 HIP1O00291 1037 aa19.21■□□□□ 0.67
CDH3-205ENST00000566808 IFIT3O14879 490 aaKnown RBP19.21■□□□□ 0.67
CDH3-205ENST00000566808 CA8P35219 290 aa19.21■□□□□ 0.67
CDH3-205ENST00000566808 CRYBB1P53674 252 aaPredicted RBP19.21■□□□□ 0.67
CDH3-205ENST00000566808 TRDNQ13061 729 aa19.21■□□□□ 0.67
CDH3-205ENST00000566808 SDF4Q9BRK5 362 aa19.21■□□□□ 0.67
CDH3-205ENST00000566808 R4GN57 208 aa19.21■□□□□ 0.67
CDH3-205ENST00000566808 ZFHX4Q86UP3 3567 aa19.2■□□□□ 0.66
CDH3-205ENST00000566808 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.2■□□□□ 0.66
CDH3-205ENST00000566808 HBP1O60381 514 aa19.2■□□□□ 0.66
CDH3-205ENST00000566808 ARP10275 920 aa19.2■□□□□ 0.66
CDH3-205ENST00000566808 WTAPQ15007 396 aa19.2■□□□□ 0.66
CDH3-205ENST00000566808 SART3Q15020 963 aaKnown RBP19.2■□□□□ 0.66
CDH3-205ENST00000566808 KIZQ2M2Z5 673 aa19.2■□□□□ 0.66
CDH3-205ENST00000566808 CATIPQ7Z7H3 387 aa19.2■□□□□ 0.66
CDH3-205ENST00000566808 RUBCNQ92622 972 aa19.2■□□□□ 0.66
CDH3-205ENST00000566808 OSMRQ99650 979 aa19.2■□□□□ 0.66
CDH3-205ENST00000566808 SFXN1Q9H9B4 322 aa19.2■□□□□ 0.66
CDH3-205ENST00000566808 SPDYE3A6NKU9 549 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 EPCAMP16422 314 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 GIT2Q14161 759 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 TMEM87AQ8NBN3 555 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 TMEM169Q96HH4 297 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 MRPL9Q9BYD2 267 aaKnown RBP19.19■□□□□ 0.66
CDH3-205ENST00000566808 ZBP1Q9H171 429 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 PSTPIP2Q9H939 334 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 KCNK12Q9HB15 430 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 SENP2Q9HC62 589 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 KCNH7Q9NS40 1196 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 IRAK3Q9Y616 596 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 CACNA1IQ9P0X4 2223 aa19.19■□□□□ 0.66
CDH3-205ENST00000566808 RFX1P22670 979 aa19.18■□□□□ 0.66
CDH3-205ENST00000566808 TMC5Q6UXY8 1006 aa19.18■□□□□ 0.66
CDH3-205ENST00000566808 CABP7Q86V35 215 aa19.18■□□□□ 0.66
CDH3-205ENST00000566808 IGSF9Q9P2J2 1179 aa19.18■□□□□ 0.66
CDH3-205ENST00000566808 DOCK8Q8NF50 2099 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 CXCL14O95715 111 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 SMARCA1P28370 1054 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 KIF5BP33176 963 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 ALDH7A1P49419 539 aaKnown RBP19.17■□□□□ 0.66
CDH3-205ENST00000566808 UBE2SQ16763 222 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 CLLU1OSQ5K130 101 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 FAM160B1Q5W0V3 765 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 KANK3Q6NY19 840 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 GPR149Q86SP6 731 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 ECHDC2Q86YB7 292 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 VPS52Q8N1B4 723 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 CTCFLQ8NI51 663 aaPredicted RBP19.17■□□□□ 0.66
CDH3-205ENST00000566808 SLC22A17Q8WUG5 538 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 PPP1R16BQ96T49 567 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 MAP3K14Q99558 947 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 WNT16Q9UBV4 365 aa19.17■□□□□ 0.66
CDH3-205ENST00000566808 MIA3Q5JRA6 1907 aa19.16■□□□□ 0.66
CDH3-205ENST00000566808 IGKV6D-21A0A0A0MT36 114 aa19.16■□□□□ 0.66
CDH3-205ENST00000566808 CARNS1A5YM72 827 aa19.16■□□□□ 0.66
CDH3-205ENST00000566808 ATG7O95352 703 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms