RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 MYOTQ9UBF9 498 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 SRPK3Q9UPE1 567 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 DLC1Q96QB1 1528 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 CLTCL1P53675 1640 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 F8W031 263 aaPredicted RBP5.49□□□□□ -1.53
LINC00561-201ENST00000565815 SCNN1BP51168 640 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 PDCD1Q15116 288 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 FAM47CQ5HY64 1035 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 BROXQ5VW32 411 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 ERCC4Q92889 916 aaPredicted RBP5.49□□□□□ -1.53
LINC00561-201ENST00000565815 EPB41L1Q9H4G0 881 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 B4GALT6Q9UBX8 382 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 TRHDEQ9UKU6 1024 aa5.49□□□□□ -1.53
LINC00561-201ENST00000565815 PPLO60437 1756 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 BRD4O60885 1362 aaPredicted RBP5.48□□□□□ -1.53
LINC00561-201ENST00000565815 GABRDO14764 452 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 GAS7O60861 476 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 H2AFYO75367 372 aaKnown RBP5.48□□□□□ -1.53
LINC00561-201ENST00000565815 KIF11P52732 1056 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 ZNF200P98182 395 aaPredicted RBP5.48□□□□□ -1.53
LINC00561-201ENST00000565815 TUSC3Q13454 348 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 ATP13A4Q4VNC1 1196 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 ODR4Q5SWX8 454 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 ABHD4Q8TB40 342 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 ZCRB1Q8TBF4 217 aaKnown RBP5.48□□□□□ -1.53
LINC00561-201ENST00000565815 YTHDC1Q96MU7 727 aaKnown RBP5.48□□□□□ -1.53
LINC00561-201ENST00000565815 SLC6A20Q9NP91 592 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 BCL9O00512 1426 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 SPATA31A1Q5TZJ5 1347 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 H7BY64 318 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 PTPN1P18031 435 aaKnown RBP5.48□□□□□ -1.53
LINC00561-201ENST00000565815 PRR5P85299 388 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 PLEKHN1Q494U1 663 aaPredicted RBP5.48□□□□□ -1.53
LINC00561-201ENST00000565815 TAF7LQ5H9L4 462 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 GALNT18Q6P9A2 607 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 OXR1Q8N573 874 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 KIAA1958Q8N8K9 716 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 SGPP1Q9BX95 441 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 IFT22Q9H7X7 185 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 CABP5Q9NP86 173 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 RIC8BQ9NVN3 520 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 COA3Q9Y2R0 106 aaPredicted RBP5.48□□□□□ -1.53
LINC00561-201ENST00000565815 ATP7BP35670 1465 aa5.48□□□□□ -1.53
LINC00561-201ENST00000565815 MT-CO1P00395 513 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 MMEP08473 750 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 DHCR24Q15392 516 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 CATSPEREQ5SY80 951 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 UNQ6494/PRO21346Q6UXR6 183 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 OR2W6PQ8NHA6 318 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 UHMK1Q8TAS1 419 aaKnown RBP5.47□□□□□ -1.53
LINC00561-201ENST00000565815 JDP2Q8WYK2 163 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 ZNF496Q96IT1 587 aaPredicted RBP5.47□□□□□ -1.53
LINC00561-201ENST00000565815 PRDM12Q9H4Q4 367 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 TOPORSQ9NS56 1045 aaPredicted RBP5.47□□□□□ -1.53
LINC00561-201ENST00000565815 C14orf119Q9NWQ9 140 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 IFT172Q9UG01 1749 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 TCRBV5S2A0A599 114 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 ZNF503-AS2A6NEH8 195 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.47□□□□□ -1.53
LINC00561-201ENST00000565815 PAPLNO95428 1278 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 CLEC2LP0C7M8 214 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 NR0B2Q15466 257 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 DDB1Q16531 1140 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 CBARPQ8N350 705 aaPredicted RBP5.47□□□□□ -1.53
LINC00561-201ENST00000565815 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
LINC00561-201ENST00000565815 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.47□□□□□ -1.53
LINC00561-201ENST00000565815 CCER2I3L3R5 266 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 FLT3P36888 993 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 GTF2A2P52657 109 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 CHRNEQ04844 493 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 RAB3GAP1Q15042 981 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 GPR19Q15760 415 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 MROH9Q5TGP6 573 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 HHIPL2Q6UWX4 724 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.46□□□□□ -1.53
LINC00561-201ENST00000565815 NLGN2Q8NFZ4 835 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 INTS4Q96HW7 963 aaKnown RBP5.46□□□□□ -1.53
LINC00561-201ENST00000565815 POFUT1Q9H488 388 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 TOMM22Q9NS69 142 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 KLHL14Q9P2G3 628 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 MCM8Q9UJA3 840 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 CASZ1Q86V15 1759 aa5.46□□□□□ -1.53
LINC00561-201ENST00000565815 TNKSO95271 1327 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 PRAMEF25A6NGN4 478 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 SCAND1P57086 179 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 LACTBP83111 547 aaPredicted RBP5.46□□□□□ -1.54
LINC00561-201ENST00000565815 RTP5Q14D33 572 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 SART3Q15020 963 aaKnown RBP5.46□□□□□ -1.54
LINC00561-201ENST00000565815 OTOP1Q7RTM1 612 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 ZNF605Q86T29 641 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 KIRREL1Q96J84 757 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 ZSWIM3Q96MP5 696 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 DIRC2Q96SL1 478 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 STK32BQ9NY57 414 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 ZKSCAN5Q9Y2L8 839 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 YBX2Q9Y2T7 364 aaKnown RBP5.46□□□□□ -1.54
LINC00561-201ENST00000565815 ALS2Q96Q42 1657 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 AATKQ6ZMQ8 1374 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms