RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 VTNP04004 478 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 CLCN3P51790 818 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 UGCGQ16739 394 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 INF2Q27J81 1249 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 LEXMQ3ZCV2 418 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 EFCAB12Q6NXP0 572 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 MIER3Q7Z3K6 550 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 GJA10Q969M2 543 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 RGS18Q9NS28 235 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 LRFN2Q9ULH4 789 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 KCNJ14Q9UNX9 436 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 MRPL42Q9Y6G3 142 aaKnown RBP22.41■■□□□ 1.18
CLN6-206ENST00000565471 BRWD1Q9NSI6 2320 aa22.41■■□□□ 1.18
CLN6-206ENST00000565471 NCOR1O75376 2440 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 CCDC194A0A1B0GVG4 234 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 MGEA5O60502 916 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 AK2P54819 239 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 COL19A1Q14993 1142 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 NAALADL2Q58DX5 795 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 SLC24A5Q71RS6 500 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 FAM228AQ86W67 206 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 P2RX5Q93086 422 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 PPP1R16BQ96T49 567 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 ADAM2Q99965 735 aa22.4■■□□□ 1.18
CLN6-206ENST00000565471 DDX25Q9UHL0 483 aaKnown RBP22.4■■□□□ 1.18
CLN6-206ENST00000565471 DENND3A2RUS2 1198 aa22.39■■□□□ 1.17
CLN6-206ENST00000565471 GRM6O15303 877 aa22.39■■□□□ 1.17
CLN6-206ENST00000565471 TARBP2Q15633 366 aaKnown RBP22.39■■□□□ 1.17
CLN6-206ENST00000565471 TCEAL5Q5H9L2 206 aa22.39■■□□□ 1.17
CLN6-206ENST00000565471 NIFKQ9BYG3 293 aaKnown RBP22.39■■□□□ 1.17
CLN6-206ENST00000565471 AKT3Q9Y243 479 aa22.39■■□□□ 1.17
CLN6-206ENST00000565471 PCDHB7Q9Y5E2 793 aa22.39■■□□□ 1.17
CLN6-206ENST00000565471 XIRP2A4UGR9 3374 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 C9IYK1 514 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 CTDNEP1O95476 244 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 MMP1P03956 469 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 GCFC2P16383 781 aaKnown RBP22.38■■□□□ 1.17
CLN6-206ENST00000565471 KCNA5P22460 613 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 NLRP11P59045 1033 aaKnown RBP22.38■■□□□ 1.17
CLN6-206ENST00000565471 TBC1D8BQ0IIM8 1120 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 LETM2Q2VYF4 491 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 XKR3Q5GH77 459 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 PPP4R3AQ6IN85 833 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 NEK8Q86SG6 692 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 LRRC71Q8N4P6 559 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 WASF1Q92558 559 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 PABPC5Q96DU9 382 aaKnown RBP22.38■■□□□ 1.17
CLN6-206ENST00000565471 ADAMTS10Q9H324 1103 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 KIAA1671Q9BY89 1806 aa22.38■■□□□ 1.17
CLN6-206ENST00000565471 ATG2AQ2TAZ0 1938 aa22.37■■□□□ 1.17
CLN6-206ENST00000565471 NCK2O43639 380 aa22.37■■□□□ 1.17
CLN6-206ENST00000565471 SLC37A4O43826 429 aa22.37■■□□□ 1.17
CLN6-206ENST00000565471 DSC3Q14574 896 aa22.37■■□□□ 1.17
CLN6-206ENST00000565471 PAN2Q504Q3 1202 aaKnown RBP22.37■■□□□ 1.17
CLN6-206ENST00000565471 NEK9Q8TD19 979 aa22.37■■□□□ 1.17
CLN6-206ENST00000565471 FAM20AQ96MK3 541 aa22.37■■□□□ 1.17
CLN6-206ENST00000565471 NAP1L4Q99733 375 aaKnown RBP22.37■■□□□ 1.17
CLN6-206ENST00000565471 ELAC1Q9H777 363 aaKnown RBP22.37■■□□□ 1.17
CLN6-206ENST00000565471 KCNMB3Q9NPA1 279 aa22.37■■□□□ 1.17
CLN6-206ENST00000565471 ORC3Q9UBD5 711 aaPredicted RBP22.37■■□□□ 1.17
CLN6-206ENST00000565471 PLAGL2Q9UPG8 496 aa22.37■■□□□ 1.17
CLN6-206ENST00000565471 STBD1O95210 358 aa22.36■■□□□ 1.17
CLN6-206ENST00000565471 EIF4BP23588 611 aaKnown RBP22.36■■□□□ 1.17
CLN6-206ENST00000565471 GATMP50440 423 aa22.36■■□□□ 1.17
CLN6-206ENST00000565471 GPC3P51654 580 aa22.36■■□□□ 1.17
CLN6-206ENST00000565471 FAM189BP81408 668 aa22.36■■□□□ 1.17
CLN6-206ENST00000565471 PUS10Q3MIT2 529 aaKnown RBP22.36■■□□□ 1.17
CLN6-206ENST00000565471 TMEM161AQ9NX61 479 aa22.36■■□□□ 1.17
CLN6-206ENST00000565471 SEPT9Q9UHD8 586 aaPredicted RBP22.36■■□□□ 1.17
CLN6-206ENST00000565471 MUC3AQ02505 3323 aa22.35■■□□□ 1.17
CLN6-206ENST00000565471 TBX3O15119 743 aa22.35■■□□□ 1.17
CLN6-206ENST00000565471 PPP2R5CQ13362 524 aa22.35■■□□□ 1.17
CLN6-206ENST00000565471 ME3Q16798 604 aa22.35■■□□□ 1.17
CLN6-206ENST00000565471 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.35■■□□□ 1.17
CLN6-206ENST00000565471 GTF3C6Q969F1 213 aa22.35■■□□□ 1.17
CLN6-206ENST00000565471 CEP89Q96ST8 783 aa22.35■■□□□ 1.17
CLN6-206ENST00000565471 GJB4Q9NTQ9 266 aa22.35■■□□□ 1.17
CLN6-206ENST00000565471 VAV3Q9UKW4 847 aa22.35■■□□□ 1.17
CLN6-206ENST00000565471 FNDC1Q4ZHG4 1894 aaPredicted RBP22.34■■□□□ 1.17
CLN6-206ENST00000565471 IGKV6-21A0A0C4DH24 114 aa22.34■■□□□ 1.17
CLN6-206ENST00000565471 ITGB1P05556 798 aa22.34■■□□□ 1.17
CLN6-206ENST00000565471 FDPSP14324 419 aaKnown RBP22.34■■□□□ 1.17
CLN6-206ENST00000565471 PSMC5P62195 406 aa22.34■■□□□ 1.17
CLN6-206ENST00000565471 CDC42EP1Q00587 391 aa22.34■■□□□ 1.17
CLN6-206ENST00000565471 CAMK1Q14012 370 aa22.34■■□□□ 1.17
CLN6-206ENST00000565471 MTERF2Q49AM1 385 aa22.34■■□□□ 1.17
CLN6-206ENST00000565471 PIK3AP1Q6ZUJ8 805 aa22.34■■□□□ 1.17
CLN6-206ENST00000565471 OXER1Q8TDS5 423 aa22.34■■□□□ 1.17
CLN6-206ENST00000565471 ATP6V0A4Q9HBG4 840 aa22.34■■□□□ 1.17
CLN6-206ENST00000565471 ALG13Q9NP73 1137 aaKnown RBP22.34■■□□□ 1.17
CLN6-206ENST00000565471 DARSP14868 501 aaKnown RBP22.33■■□□□ 1.17
CLN6-206ENST00000565471 IBSPP21815 317 aaPredicted RBP22.33■■□□□ 1.17
CLN6-206ENST00000565471 FAM102BQ5T8I3 360 aa22.33■■□□□ 1.17
CLN6-206ENST00000565471 NECAB1Q8N987 351 aa22.33■■□□□ 1.17
CLN6-206ENST00000565471 KLHL23Q8NBE8 558 aa22.33■■□□□ 1.17
CLN6-206ENST00000565471 SPPL3Q8TCT6 385 aa22.33■■□□□ 1.17
CLN6-206ENST00000565471 GRXCR2A6NFK2 248 aa22.32■■□□□ 1.16
CLN6-206ENST00000565471 TBKBP1A7MCY6 615 aa22.32■■□□□ 1.16
CLN6-206ENST00000565471 EML1O00423 815 aa22.32■■□□□ 1.16
CLN6-206ENST00000565471 HOXA2O43364 376 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms