RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 EVPLQ92817 2033 aa9.73□□□□□ -0.85
CAPN3-213ENST00000565173 FNDC1Q4ZHG4 1894 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-213ENST00000565173 MSH4O15457 936 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 DCXO43602 365 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 GLP2RO95838 553 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 PSAPP07602 524 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 IFNAR1P17181 557 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 HOXD11P31277 338 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-213ENST00000565173 USP11P51784 963 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 CCT2P78371 535 aaKnown RBP9.72□□□□□ -0.85
CAPN3-213ENST00000565173 SMAD4Q13485 552 aaKnown RBP9.72□□□□□ -0.85
CAPN3-213ENST00000565173 LRRC55Q6ZSA7 311 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 TRMT1LQ7Z2T5 733 aaKnown RBP9.72□□□□□ -0.85
CAPN3-213ENST00000565173 CKAP2LQ8IYA6 745 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 METTL13Q8N6R0 699 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 EFHBQ8N7U6 833 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 PPP1R16BQ96T49 567 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 CWH43Q9H720 699 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 ELAC1Q9H777 363 aaKnown RBP9.72□□□□□ -0.85
CAPN3-213ENST00000565173 NCOA5Q9HCD5 579 aaKnown RBP9.72□□□□□ -0.85
CAPN3-213ENST00000565173 RNF19AQ9NV58 838 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 TYW1Q9NV66 732 aaKnown RBP9.72□□□□□ -0.85
CAPN3-213ENST00000565173 VPS54Q9P1Q0 977 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 CD207Q9UJ71 328 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 LRFN2Q9ULH4 789 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 HCN4Q9Y3Q4 1203 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 PLXNA4Q9HCM2 1894 aa9.72□□□□□ -0.85
CAPN3-213ENST00000565173 DENND3A2RUS2 1198 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 TBKBP1A7MCY6 615 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 WDR64B1ANS9 1081 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 M0R2N6 131 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 MAGEB2O15479 319 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 FGF18O76093 207 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 FGFR1P11362 822 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 IBSPP21815 317 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-213ENST00000565173 NRIP1P48552 1158 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 CLCN3P51790 818 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 NLRP11P59045 1033 aaKnown RBP9.71□□□□□ -0.86
CAPN3-213ENST00000565173 ERVFC1P60507 584 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 UBE3AQ05086 875 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 COASYQ13057 564 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 TOB2Q14106 344 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-213ENST00000565173 UGCGQ16739 394 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 ODR4Q5SWX8 454 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 EFCAB12Q6NXP0 572 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 B3GNT9Q6UX72 402 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 RBM23Q86U06 439 aaKnown RBP9.71□□□□□ -0.86
CAPN3-213ENST00000565173 SMRP1Q8NCR6 262 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 VN1R2Q8NFZ6 395 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 BICD2Q8TD16 824 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 SLC5A5Q92911 643 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 GJA10Q969M2 543 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 CCDC136Q96JN2 1154 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 CASD1Q96PB1 797 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 CEP89Q96ST8 783 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 SLC26A6Q9BXS9 759 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 DISC1Q9NRI5 854 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 TMEM161AQ9NX61 479 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 PCDHB12Q9Y5F1 795 aa9.71□□□□□ -0.86
CAPN3-213ENST00000565173 USP34Q70CQ2 3546 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 CYP3A7-CYP3A51PA0A087WV96 503 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 FSCN2O14926 492 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 PER2O15055 1255 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 PSMD10O75832 226 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 STBD1O95210 358 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 OATP04181 439 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 EIF4BP23588 611 aaKnown RBP9.7□□□□□ -0.86
CAPN3-213ENST00000565173 CYP3A7P24462 503 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 PSMA5P28066 241 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 NDUFV1P49821 464 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 RBM10P98175 930 aaKnown RBP9.7□□□□□ -0.86
CAPN3-213ENST00000565173 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
CAPN3-213ENST00000565173 KCNC3Q14003 757 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 TARBP2Q15633 366 aaKnown RBP9.7□□□□□ -0.86
CAPN3-213ENST00000565173 NPY5RQ15761 445 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 HERC4Q5GLZ8 1057 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-213ENST00000565173 RUFY3Q7L099 469 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 RNF135Q8IUD6 432 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 LRRC71Q8N4P6 559 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 COLGALT1Q8NBJ5 622 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 TBCKQ8TEA7 893 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 FAM167AQ96KS9 214 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 RIT2Q99578 217 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 UPF3BQ9BZI7 483 aaKnown RBP9.7□□□□□ -0.86
CAPN3-213ENST00000565173 UNC45AQ9H3U1 944 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 TLE6Q9H808 572 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 ATP6V0A4Q9HBG4 840 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 SH3GLB2Q9NR46 395 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 NRBP2Q9NSY0 501 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 RNF216Q9NWF9 866 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-213ENST00000565173 MUTYHQ9UIF7 546 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 BARX2Q9UMQ3 279 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-213ENST00000565173 CEP131Q9UPN4 1083 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 AKT3Q9Y243 479 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 SAMM50Q9Y512 469 aa9.7□□□□□ -0.86
CAPN3-213ENST00000565173 MYH9P35579 1960 aaKnown RBP9.7□□□□□ -0.86
CAPN3-213ENST00000565173 LOC730098B7Z3J9 87 aa9.69□□□□□ -0.86
CAPN3-213ENST00000565173 CENPBP07199 599 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-213ENST00000565173 GPC3P51654 580 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 980.3 ms