RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ZNF568Q3ZCX4 644 aa7.03□□□□□ -1.28
UBR1-205ENST00000564540 TRIM68Q6AZZ1 485 aa7.03□□□□□ -1.28
UBR1-205ENST00000564540 ESRP1Q6NXG1 681 aaKnown RBP7.03□□□□□ -1.28
UBR1-205ENST00000564540 FILIP1Q7Z7B0 1213 aa7.03□□□□□ -1.28
UBR1-205ENST00000564540 BCL6BQ8N143 479 aaPredicted RBP7.03□□□□□ -1.28
UBR1-205ENST00000564540 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
UBR1-205ENST00000564540 SEC61A2Q9H9S3 476 aa7.03□□□□□ -1.28
UBR1-205ENST00000564540 ZKSCAN5Q9Y2L8 839 aa7.03□□□□□ -1.28
UBR1-205ENST00000564540 ENPP3O14638 875 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 MRE11P49959 708 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 ADAM17P78536 824 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 DSG1Q02413 1049 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 SEPT7Q16181 437 aaKnown RBP7.02□□□□□ -1.29
UBR1-205ENST00000564540 ZMAT1Q5H9K5 638 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 SLFN12LQ6IEE8 588 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 CHST13Q8NET6 341 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 CHTF18Q8WVB6 975 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 MFSD3Q96ES6 412 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 SCYL1Q96KG9 808 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 THG1LQ9NWX6 298 aaKnown RBP7.02□□□□□ -1.29
UBR1-205ENST00000564540 PLAAQ9Y263 795 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 NR2E1Q9Y466 385 aa7.02□□□□□ -1.29
UBR1-205ENST00000564540 UBA6A0AVT1 1052 aaPredicted RBP7.01□□□□□ -1.29
UBR1-205ENST00000564540 MATN2O00339 956 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 GAS7O60861 476 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 RAC3P60763 192 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 ROM1Q03395 351 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 AGBL4Q5VU57 503 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 TCTN3Q6NUS6 607 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 GIMAP6Q6P9H5 292 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 TAX1BP1Q86VP1 789 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 KIF18BQ86Y91 864 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 RTKN2Q8IZC4 609 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 TTC9BQ8N6N2 239 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 DNERQ8NFT8 737 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 E2F7Q96AV8 911 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 MAML3Q96JK9 1138 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 TUBGCP5Q96RT8 1024 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 DPYSL5Q9BPU6 564 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 CD248Q9HCU0 757 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 TOMM22Q9NS69 142 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 IFT57Q9NWB7 429 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 FAM184BQ9ULE4 1060 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 SPO11Q9Y5K1 396 aa7.01□□□□□ -1.29
UBR1-205ENST00000564540 PATE3B3GLJ2 98 aa7□□□□□ -1.29
UBR1-205ENST00000564540 FOXS1O43638 330 aa7□□□□□ -1.29
UBR1-205ENST00000564540 ZNF20P17024 532 aa7□□□□□ -1.29
UBR1-205ENST00000564540 MEOX1P50221 254 aa7□□□□□ -1.29
UBR1-205ENST00000564540 MYBPC3Q14896 1274 aa7□□□□□ -1.29
UBR1-205ENST00000564540 EPHA7Q15375 998 aa7□□□□□ -1.29
UBR1-205ENST00000564540 TTC38Q5R3I4 469 aa7□□□□□ -1.29
UBR1-205ENST00000564540 PRAMEF9Q5VWM5 478 aa7□□□□□ -1.29
UBR1-205ENST00000564540 RTF1Q92541 710 aaKnown RBP7□□□□□ -1.29
UBR1-205ENST00000564540 ARHGAP6O43182 974 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 MAFO75444 373 aaPredicted RBP6.99□□□□□ -1.29
UBR1-205ENST00000564540 ANTXR2P58335 489 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 MAP3K12Q12852 859 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 ZXDCQ2QGD7 858 aaPredicted RBP6.99□□□□□ -1.29
UBR1-205ENST00000564540 ZNF585AQ6P3V2 769 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 USP30Q70CQ3 517 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 PPM1KQ8N3J5 372 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 GIMAP8Q8ND71 665 aaPredicted RBP6.99□□□□□ -1.29
UBR1-205ENST00000564540 OR5AN1Q8NGI8 311 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 OR14K1Q8NGZ2 314 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 CFHR4Q92496 578 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 OR10A2Q9H208 303 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 ZMAT4Q9H898 229 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 OAZ3Q9UMX2 235 aa6.99□□□□□ -1.29
UBR1-205ENST00000564540 A0A087X0B3 334 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 TLDC2A0PJX2 215 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 TGM5O43548 720 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 CDC14BO60729 498 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 CR2P20023 1033 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 ADAM15Q13444 863 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 NFYCQ13952 458 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 PLEKHG4Q58EX7 1191 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 SMC1BQ8NDV3 1235 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 Q8TCH9 128 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 GPR101Q96P66 508 aaPredicted RBP6.98□□□□□ -1.29
UBR1-205ENST00000564540 GPR20Q99678 358 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 C12orf65Q9H3J6 166 aaKnown RBP6.98□□□□□ -1.29
UBR1-205ENST00000564540 POFUT1Q9H488 388 aa6.98□□□□□ -1.29
UBR1-205ENST00000564540 GSG1L2A8MUP6 293 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 ZNF623O75123 536 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 APOL3O95236 402 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 MYCLP1P12525 358 aaPredicted RBP6.97□□□□□ -1.29
UBR1-205ENST00000564540 INSRRP14616 1297 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 GYS2P54840 703 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 UNQ6494/PRO21346Q6UXR6 183 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 NME9Q86XW9 330 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 EFHBQ8N7U6 833 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 C7orf31Q8N865 590 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 DVL3Q92997 716 aaPredicted RBP6.97□□□□□ -1.29
UBR1-205ENST00000564540 MYL10Q9BUA6 226 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 C1QTNF3Q9BXJ4 246 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 SEMA4AQ9H3S1 761 aa6.97□□□□□ -1.29
UBR1-205ENST00000564540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.97□□□□□ -1.29
UBR1-205ENST00000564540 ZFR2Q9UPR6 939 aaKnown RBP6.97□□□□□ -1.29
UBR1-205ENST00000564540 PDE8AO60658 829 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms