RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 TSHZ1Q6ZSZ6 1077 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 LRRC71Q8N4P6 559 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 METTL13Q8N6R0 699 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 CEP170P1Q96L14 293 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 JPH2Q9BR39 696 aaPredicted RBP19.35■□□□□ 0.69
USB1-209ENST00000564387 SH2D3AQ9BRG2 576 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 ADAMTS10Q9H324 1103 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 ZSCAN16Q9H4T2 348 aaPredicted RBP19.35■□□□□ 0.69
USB1-209ENST00000564387 AGO3Q9H9G7 860 aaKnown RBP19.35■□□□□ 0.69
USB1-209ENST00000564387 CDHR5Q9HBB8 845 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 LRWD1Q9UFC0 647 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 STK24Q9Y6E0 443 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 MORC2Q9Y6X9 1032 aaPredicted RBP19.35■□□□□ 0.69
USB1-209ENST00000564387 GHRP10912 638 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 WDR5P61964 334 aaKnown RBP19.34■□□□□ 0.69
USB1-209ENST00000564387 CDC42EP1Q00587 391 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 TMEM62Q0P6H9 643 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 DRP2Q13474 957 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 ERMNQ8TAM6 284 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 MAP7D2Q96T17 732 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 SLC9A7Q96T83 725 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 IFIH1Q9BYX4 1025 aaKnown RBP19.34■□□□□ 0.69
USB1-209ENST00000564387 RAB34Q9BZG1 259 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 DBR1Q9UK59 544 aaKnown RBP19.34■□□□□ 0.69
USB1-209ENST00000564387 ARID2Q68CP9 1835 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 CHD9Q3L8U1 2897 aa19.34■□□□□ 0.69
USB1-209ENST00000564387 RBAK-RBAKDNI3L0D1 243 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 GAS2O43903 313 aaKnown RBP19.33■□□□□ 0.68
USB1-209ENST00000564387 VTNP04004 478 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 RARRES1P49788 294 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 HAUS3Q68CZ6 603 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 TMEM40Q8WWA1 233 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 NACC1Q96RE7 527 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 MMTAG2Q9BU76 263 aaKnown RBP19.33■□□□□ 0.68
USB1-209ENST00000564387 SUGCTQ9HAC7 445 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 MICAL3Q7RTP6 2002 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 PTPRSQ13332 1948 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 LOXHD1Q8IVV2 1947 aa19.33■□□□□ 0.68
USB1-209ENST00000564387 GRXCR1A8MXD5 290 aa19.32■□□□□ 0.68
USB1-209ENST00000564387 HSP90AA1P07900 732 aaKnown RBP19.32■□□□□ 0.68
USB1-209ENST00000564387 ATP2A2P16615 1042 aaKnown RBP19.32■□□□□ 0.68
USB1-209ENST00000564387 DNM2P50570 870 aa19.32■□□□□ 0.68
USB1-209ENST00000564387 GPC3P51654 580 aa19.32■□□□□ 0.68
USB1-209ENST00000564387 NLRP11P59045 1033 aaKnown RBP19.32■□□□□ 0.68
USB1-209ENST00000564387 PTPAQ15257 358 aa19.32■□□□□ 0.68
USB1-209ENST00000564387 SF3A1Q15459 793 aaKnown RBP19.32■□□□□ 0.68
USB1-209ENST00000564387 ECM1Q16610 540 aa19.32■□□□□ 0.68
USB1-209ENST00000564387 XKR9Q5GH70 373 aa19.32■□□□□ 0.68
USB1-209ENST00000564387 SLC7A3Q8WY07 619 aa19.32■□□□□ 0.68
USB1-209ENST00000564387 PADI3Q9ULW8 664 aa19.32■□□□□ 0.68
USB1-209ENST00000564387 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.31■□□□□ 0.68
USB1-209ENST00000564387 ZBBXA8MT70 800 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 KIZQ2M2Z5 673 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 HYIQ5T013 277 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 KCTD17Q8N5Z5 321 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 PIGOQ8TEQ8 1089 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 PBX4Q9BYU1 374 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 ERVK-5Q9HDB9 667 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 XPNPEP1Q9NQW7 623 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 AKT3Q9Y243 479 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 CLIC4Q9Y696 253 aa19.31■□□□□ 0.68
USB1-209ENST00000564387 TMEM265A0A087WTH1 108 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 DGAT1O75907 488 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 EIF4BP23588 611 aaKnown RBP19.3■□□□□ 0.68
USB1-209ENST00000564387 CD52P31358 61 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 CCT6AP40227 531 aaKnown RBP19.3■□□□□ 0.68
USB1-209ENST00000564387 POLGP54098 1239 aaPredicted RBP19.3■□□□□ 0.68
USB1-209ENST00000564387 DEFB103AP81534 67 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 EMC2Q15006 297 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 FAM173BQ6P4H8 233 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 POTEGQ6S5H5 508 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.3■□□□□ 0.68
USB1-209ENST00000564387 HERC6Q8IVU3 1022 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 CRIPAKQ8N1N5 446 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 AK8Q96MA6 479 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 FTHL17Q9BXU8 183 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 SUCLA2Q9P2R7 463 aaPredicted RBP19.3■□□□□ 0.68
USB1-209ENST00000564387 NOC2LQ9Y3T9 749 aaKnown RBP19.3■□□□□ 0.68
USB1-209ENST00000564387 PCDHA11Q9Y5I1 949 aa19.3■□□□□ 0.68
USB1-209ENST00000564387 VWA3AA6NCI4 1184 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 PP2D1A8MPX8 630 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 ENPP3O14638 875 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 SLC26A4O43511 780 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 ZSCAN22P10073 491 aaPredicted RBP19.29■□□□□ 0.68
USB1-209ENST00000564387 DARSP14868 501 aaKnown RBP19.29■□□□□ 0.68
USB1-209ENST00000564387 DNAJB2P25686 324 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 PBX2P40425 430 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 KCNJ6P48051 423 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 RAB30Q15771 203 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 KRT79Q5XKE5 535 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 RTN4RL1Q86UN2 441 aaPredicted RBP19.29■□□□□ 0.68
USB1-209ENST00000564387 ZNF410Q86VK4 478 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 SNX29Q8TEQ0 813 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 TCP11Q8WWU5 503 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 LINC01599Q8WXQ3 324 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 TOP1MTQ969P6 601 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 OSMRQ99650 979 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 TMX1Q9H3N1 280 aa19.29■□□□□ 0.68
USB1-209ENST00000564387 GBF1Q92538 1859 aa19.28■□□□□ 0.68
USB1-209ENST00000564387 A0A087WWV3 80 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms