RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 TSHZ1Q6ZSZ6 1077 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 SRGAP1Q7Z6B7 1085 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 CABP7Q86V35 215 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 C7orf31Q8N865 590 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 TSPEARQ8WU66 669 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 IL17RAQ96F46 866 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 PEX11GQ96HA9 241 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 MPHOSPH6Q99547 160 aaKnown RBP3.31□□□□□ -1.88
CHD9-209ENST00000564255 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 GTPBP4Q9BZE4 634 aaKnown RBP3.31□□□□□ -1.88
CHD9-209ENST00000564255 RNF38Q9H0F5 515 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 NUDT5Q9UKK9 219 aa3.31□□□□□ -1.88
CHD9-209ENST00000564255 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 PRAMEF22A3QJZ6 481 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 PSPNO60542 156 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 CTNND1O60716 968 aaKnown RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 ZBED1O96006 694 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 ERVFC1P60507 584 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 ERVFRD-1P60508 538 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 BRD3Q15059 726 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 SAFBQ15424 915 aaKnown RBP eCLIP3.3□□□□□ -1.88
CHD9-209ENST00000564255 ANO4Q32M45 955 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 TIGD5Q53EQ6 642 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 PRAMEF18Q5VWM3 479 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 MBNL2Q5VZF2 373 aaKnown RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 CCDC62Q6P9F0 684 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 SLC23A3Q6PIS1 610 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 PAQR3Q6TCH7 311 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 OVCH2Q7RTZ1 564 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 PROSER1Q86XN7 944 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 DTX1Q86Y01 620 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 THEMISQ8N1K5 641 aaPredicted RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 ARRDC4Q8NCT1 418 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 DIS3LQ8TF46 1054 aaKnown RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 FERMT2Q96AC1 680 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 TSPAN17Q96FV3 270 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 TUBGCP5Q96RT8 1024 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 MYL10Q9BUA6 226 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 SAP30BPQ9UHR5 308 aaKnown RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 SERPINB13Q9UIV8 391 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 ZC3H12DA2A288 527 aaKnown RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 LRG1P02750 347 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 CYBBP04839 570 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 LPLP06858 475 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 RHCEP18577 417 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 SPINK2P20155 84 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 PDCP20941 246 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 THBS2P35442 1172 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 FXR1P51114 621 aaKnown RBP eCLIP3.3□□□□□ -1.88
CHD9-209ENST00000564255 GJA9P57773 515 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 RHDQ02161 417 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 PICALMQ13492 652 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 TOGARAM2Q6ZUX3 1019 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 USP45Q70EL2 814 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 MIB1Q86YT6 1006 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 SIRT2Q8IXJ6 389 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 KIAA0319LQ8IZA0 1049 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 MIER2Q8N344 545 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 MVB12AQ96EY5 273 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 ARPC5LQ9BPX5 153 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 PITHD1Q9GZP4 211 aaPredicted RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 KCTD10Q9H3F6 313 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 IFT122Q9HBG6 1241 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 DTLQ9NZJ0 730 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 DENND2AQ9ULE3 1009 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 EDARQ9UNE0 448 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 COBLO75128 1261 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 NBPF7P0C2Y1 421 aaPredicted RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 OSMP13725 252 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 SERPINB3P29508 390 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 SLC6A3Q01959 620 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 KIF23Q02241 960 aaPredicted RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 ADCY2Q08462 1091 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 TRIM25Q14258 630 aaKnown RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 SLC9A5Q14940 896 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 C4orf46Q504U0 113 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 CATIPQ7Z7H3 387 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 VSIG10LQ86VR7 867 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 FAM126BQ8IXS8 530 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 ZBTB34Q8NCN2 500 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 C1GALT1C1Q96EU7 318 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 ELAC2Q9BQ52 826 aaKnown RBP3.3□□□□□ -1.88
CHD9-209ENST00000564255 TMEM60Q9H2L4 133 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 TAGLN3Q9UI15 199 aa3.3□□□□□ -1.88
CHD9-209ENST00000564255 MYPNQ86TC9 1320 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 NFIBO00712 420 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 MAFO75444 373 aaPredicted RBP3.29□□□□□ -1.88
CHD9-209ENST00000564255 EDNRBP24530 442 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 LGALS4P56470 323 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 NR1I3Q14994 352 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 MILR1Q7Z6M3 343 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 HIPK4Q8NE63 616 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 GJA10Q969M2 543 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 ACO2Q99798 780 aaKnown RBP3.29□□□□□ -1.88
CHD9-209ENST00000564255 AMNQ9BXJ7 453 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 POFUT1Q9H488 388 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 KLHL11Q9NVR0 708 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 CCDC39Q9UFE4 941 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 PRSS50Q9UI38 385 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 PHTF1Q9UMS5 762 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms