RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 ITGB1P05556 798 aa18.9■□□□□ 0.62
CCNF-203ENST00000564236 TARBP2Q15633 366 aaKnown RBP18.9■□□□□ 0.62
CCNF-203ENST00000564236 UIMC1Q96RL1 719 aa18.9■□□□□ 0.62
CCNF-203ENST00000564236 OSMRQ99650 979 aa18.9■□□□□ 0.62
CCNF-203ENST00000564236 ADAMTS10Q9H324 1103 aa18.9■□□□□ 0.62
CCNF-203ENST00000564236 NRBP2Q9NSY0 501 aa18.9■□□□□ 0.62
CCNF-203ENST00000564236 FAM50BQ9Y247 325 aa18.9■□□□□ 0.62
CCNF-203ENST00000564236 GINS2Q9Y248 185 aa18.9■□□□□ 0.62
CCNF-203ENST00000564236 PCDHB7Q9Y5E2 793 aa18.9■□□□□ 0.62
CCNF-203ENST00000564236 H3BQ06 376 aaPredicted RBP18.89■□□□□ 0.61
CCNF-203ENST00000564236 GAS7O60861 476 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 GPR37L1O60883 481 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 DNAJB1P25685 340 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 PRKCEQ02156 737 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 UBE3AQ05086 875 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 LRCH2Q5VUJ6 765 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 BLIDQ8IZY5 108 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 GJD3Q8N144 294 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 KLHL23Q8NBE8 558 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 ETNPPLQ8TBG4 499 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 CEP89Q96ST8 783 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 TEKT3Q9BXF9 490 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 UNC45AQ9H3U1 944 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 ALG13Q9NP73 1137 aaKnown RBP18.89■□□□□ 0.61
CCNF-203ENST00000564236 TMEM161AQ9NX61 479 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 LRFN2Q9ULH4 789 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 ARIH1Q9Y4X5 557 aaPredicted RBP18.89■□□□□ 0.61
CCNF-203ENST00000564236 SAMM50Q9Y512 469 aa18.89■□□□□ 0.61
CCNF-203ENST00000564236 DENND3A2RUS2 1198 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 C19orf67A6NJJ6 358 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 CPLX1O14810 134 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 VTNP04004 478 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 EIF4BP23588 611 aaKnown RBP18.88■□□□□ 0.61
CCNF-203ENST00000564236 TMOD1P28289 359 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 CLCN3P51790 818 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 UGCGQ16739 394 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 EFCAB12Q6NXP0 572 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 CPLX2Q6PUV4 134 aaKnown RBP18.88■□□□□ 0.61
CCNF-203ENST00000564236 METTL13Q8N6R0 699 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 MAP7D2Q96T17 732 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 NIFKQ9BYG3 293 aaKnown RBP18.88■□□□□ 0.61
CCNF-203ENST00000564236 UPF3BQ9BZI7 483 aaKnown RBP18.88■□□□□ 0.61
CCNF-203ENST00000564236 C11orf16Q9NQ32 467 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 CLDND1Q9NY35 253 aa18.88■□□□□ 0.61
CCNF-203ENST00000564236 IGKV6-21A0A0C4DH24 114 aa18.87■□□□□ 0.61
CCNF-203ENST00000564236 STBD1O95210 358 aa18.87■□□□□ 0.61
CCNF-203ENST00000564236 GATMP50440 423 aa18.87■□□□□ 0.61
CCNF-203ENST00000564236 ADAM15Q13444 863 aa18.87■□□□□ 0.61
CCNF-203ENST00000564236 SMAD2Q15796 467 aaKnown RBP18.87■□□□□ 0.61
CCNF-203ENST00000564236 CSPP1Q1MSJ5 1256 aa18.87■□□□□ 0.61
CCNF-203ENST00000564236 ATG2AQ2TAZ0 1938 aa18.87■□□□□ 0.61
CCNF-203ENST00000564236 PAN2Q504Q3 1202 aaKnown RBP18.87■□□□□ 0.61
CCNF-203ENST00000564236 PPP2R3CQ969Q6 453 aa18.87■□□□□ 0.61
CCNF-203ENST00000564236 STK36Q9NRP7 1315 aa18.87■□□□□ 0.61
CCNF-203ENST00000564236 PDRG1Q9NUG6 133 aa18.87■□□□□ 0.61
CCNF-203ENST00000564236 TBX10O75333 385 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 TDP2O95551 362 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 GPC3P51654 580 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 NLRP11P59045 1033 aaKnown RBP18.86■□□□□ 0.61
CCNF-203ENST00000564236 CDC42EP1Q00587 391 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 ZP2Q05996 745 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 DLX2Q07687 328 aaPredicted RBP18.86■□□□□ 0.61
CCNF-203ENST00000564236 TMEM31Q5JXX7 168 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 POF1BQ8WVV4 589 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 LRFN3Q9BTN0 628 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 PHF20Q9BVI0 1012 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 AAASQ9NRG9 546 aa18.86■□□□□ 0.61
CCNF-203ENST00000564236 CDKL5O76039 1030 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 EYA4O95677 639 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 DARSP14868 501 aaKnown RBP18.85■□□□□ 0.61
CCNF-203ENST00000564236 ANAPC15P60006 121 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 SCRN1Q12765 414 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 NONOQ15233 471 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCNF-203ENST00000564236 XKR3Q5GH77 459 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 FAM102BQ5T8I3 360 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 PPP4R3AQ6IN85 833 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 KRT25Q7Z3Z0 450 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 ADHFE1Q8IWW8 467 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 LRRC71Q8N4P6 559 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 EFHBQ8N7U6 833 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 MSLNLQ96KJ4 702 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 AIFM3Q96NN9 605 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 CWH43Q9H720 699 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 ATP6V0A4Q9HBG4 840 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 KCNMB3Q9NPA1 279 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 AKT3Q9Y243 479 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 LZTS1Q9Y250 596 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 PCDHB12Q9Y5F1 795 aa18.85■□□□□ 0.61
CCNF-203ENST00000564236 TBKBP1A7MCY6 615 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 HOXA2O43364 376 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 MBTPS2O43462 519 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 CHMP2AO43633 222 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 GTF2F1P35269 517 aaKnown RBP eCLIP18.84■□□□□ 0.61
CCNF-203ENST00000564236 IRS1P35568 1242 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 TBC1D8BQ0IIM8 1120 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 SMAD4Q13485 552 aaKnown RBP18.84■□□□□ 0.61
CCNF-203ENST00000564236 MIER3Q7Z3K6 550 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 GJA10Q969M2 543 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 PPP1R16BQ96T49 567 aa18.84■□□□□ 0.61
CCNF-203ENST00000564236 TRAIPQ9BWF2 469 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms