RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CRELD1Q96HD1 420 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 INTS4Q96HW7 963 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 SPACA7Q96KW9 195 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 AMNQ9BXJ7 453 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 NIF3L1Q9GZT8 377 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 OSBPL2Q9H1P3 480 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 GJB4Q9NTQ9 266 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 RNF146Q9NTX7 359 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 SAGE1Q9NXZ1 904 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 BARHL2Q9NY43 387 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 SEC63Q9UGP8 760 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 SALL4Q9UJQ4 1053 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 DDX41Q9UJV9 622 aaKnown RBP5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 CCPG1Q9ULG6 757 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 PARP14Q460N5 1801 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 ABCB11O95342 1321 aa5.97□□□□□ -1.45
HERPUD1-207ENST00000563781 hCG_1984214I3L0E3 225 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 NFIBO00712 420 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 PHACTR2O75167 634 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 KIF4AO95239 1232 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 SLC25A27O95847 323 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 ALBP02768 609 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 ALAS1P13196 640 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 GJB2P29033 226 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 MAPK8P45983 427 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 DGKGP49619 791 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 AKAP17AQ02040 695 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 PLS1Q14651 629 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 TKFCQ3LXA3 575 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 PERM1Q5SV97 790 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 LINC00114Q6XXX2 140 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 HEATR3Q7Z4Q2 680 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 ZNF713Q8N859 430 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 MICAL1Q8TDZ2 1067 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 TBC1D5Q92609 795 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 FGD4Q96M96 766 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 LPIN3Q9BQK8 851 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 ALG1Q9BT22 464 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 ZSWIM4Q9H7M6 989 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 PRDM6Q9NQX0 595 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 FRRS1LQ9P0K9 344 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 VPS54Q9P1Q0 977 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 PNMA2Q9UL42 364 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 SMC3Q9UQE7 1217 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 CTDP1Q9Y5B0 961 aaPredicted RBP5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 PCDHA1Q9Y5I3 950 aa5.96□□□□□ -1.46
HERPUD1-207ENST00000563781 ESYT2A0FGR8 921 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 M0R082 166 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 MEIS2O14770 477 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 EREGO14944 169 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 HSPA8P11142 646 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 HSD3B2P26439 372 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 DNAJA1P31689 397 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 COPB2P35606 906 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 DDIT3P35638 169 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 ANP32AP39687 249 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 HSD17B4P51659 736 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 NAPAP54920 295 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 CCNA1P78396 465 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 LACTBP83111 547 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 GRB14Q14449 540 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 BECN1Q14457 450 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 PTPROQ16827 1216 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 CCDC181Q5TID7 509 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 PSAPL1Q6NUJ1 521 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 SLC30A10Q6XR72 485 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 PLEKHH3Q7Z736 793 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 NCAPG2Q86XI2 1143 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 CEP120Q8N960 986 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 CHST13Q8NET6 341 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 ZNF417Q8TAU3 575 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 SYTL5Q8TDW5 730 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 ZNF296Q8WUU4 475 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 WASF1Q92558 559 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 TTC9Q92623 222 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 ZNF587Q96SQ5 575 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 PHF20Q9BVI0 1012 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 ARHGAP39Q9C0H5 1083 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 ZMYND12Q9H0C1 365 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 MROH8Q9H579 483 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 ACAD9Q9H845 621 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 A1CFQ9NQ94 594 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 SH3GLB2Q9NR46 395 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 HOMER2Q9NSB8 354 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 COL20A1Q9P218 1284 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 KANSL3Q9P2N6 904 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 KCNJ14Q9UNX9 436 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 MRPL11Q9Y3B7 192 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 ASTN1O14525 1302 aa5.95□□□□□ -1.46
HERPUD1-207ENST00000563781 BAZ2BQ9UIF8 2168 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 DNAJC25-GNG10A0A024R161 153 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 SMCO2A6NFE2 343 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 FOXN1O15353 648 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 COBLO75128 1261 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 RGS9O75916 674 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 GHRHP01286 108 aa5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 HSPA1AP0DMV8 641 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 HSPA1BP0DMV9 641 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-207ENST00000563781 EIF2AK2P19525 551 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms