RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 GNAT1P11488 350 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 STX2P32856 288 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 RAD23BP54727 409 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
CCDC187-201ENST00000563590 RBM26Q5T8P6 1007 aaKnown RBP13.78□□□□□ -0.2
CCDC187-201ENST00000563590 RCSD1Q6JBY9 416 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 ALKBH5Q6P6C2 394 aaKnown RBP13.78□□□□□ -0.2
CCDC187-201ENST00000563590 METTL13Q8N6R0 699 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 ZNF384Q8TF68 577 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 ANKS1AQ92625 1134 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 ARHGEF2Q92974 986 aaKnown RBP13.78□□□□□ -0.2
CCDC187-201ENST00000563590 CUEDC2Q9H467 287 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 CNOT10Q9H9A5 744 aaKnown RBP13.78□□□□□ -0.2
CCDC187-201ENST00000563590 LRRC4CQ9HCJ2 640 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 DOCK2Q92608 1830 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 GRID2IPA4D2P6 1211 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 NQO1P15559 274 aaKnown RBP13.78□□□□□ -0.2
CCDC187-201ENST00000563590 RNASELQ05823 741 aaKnown RBP13.78□□□□□ -0.2
CCDC187-201ENST00000563590 XRCC4Q13426 336 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 SLC29A2Q14542 456 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 EPS8L3Q8TE67 593 aaKnown RBP13.78□□□□□ -0.2
CCDC187-201ENST00000563590 DBNDD1Q9H9R9 158 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 BATF3Q9NR55 127 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 SLC12A6Q9UHW9 1150 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 INTUQ9ULD6 942 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 SSU72P8A0A1W2PR75 194 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 M0R2N6 131 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 KIF3CO14782 793 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 FGRP09769 529 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 KCNMA1Q12791 1236 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 MEI1Q5TIA1 1274 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 KRT79Q5XKE5 535 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 CAPN12Q6ZSI9 719 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 MYOCDQ8IZQ8 938 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 SH2D3AQ9BRG2 576 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 TRIM7Q9C029 511 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 TRIM4Q9C037 500 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 GGA2Q9UJY4 613 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 ATP6V0A2Q9Y487 856 aa13.77□□□□□ -0.2
CCDC187-201ENST00000563590 MYMKA6NI61 221 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 FOXO6A8MYZ6 492 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 GBP1P32455 592 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 DR1Q01658 176 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 NAB2Q15742 525 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 CCDC105Q8IYK2 499 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 TBCKQ8TEA7 893 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
CCDC187-201ENST00000563590 KDM4CQ9H3R0 1056 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 MTRF1LQ9UGC7 380 aaKnown RBP13.77□□□□□ -0.21
CCDC187-201ENST00000563590 AMFRQ9UKV5 643 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 LTBP4Q8N2S1 1624 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 SFI1A8K8P3 1242 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 PMS2P54278 862 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 SLC8A3P57103 927 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 FAM129AQ9BZQ8 928 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 RAB17Q9H0T7 212 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 MAGEF1Q9HAY2 307 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 KLHL14Q9P2G3 628 aa13.77□□□□□ -0.21
CCDC187-201ENST00000563590 CHORDC1Q9UHD1 332 aaPredicted RBP13.77□□□□□ -0.21
CCDC187-201ENST00000563590 USP17L5A8MUK1 530 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 H0YGN5 161 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 RASGRF2O14827 1237 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 SNUPNO95149 360 aaKnown RBP13.76□□□□□ -0.21
CCDC187-201ENST00000563590 H2AFZP0C0S5 128 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 ECHS1P30084 290 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 PPP1R2P41236 205 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 ZNF131P52739 623 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 ANKRD20A1Q5TYW2 823 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 ANKRD20A3Q5VUR7 823 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 LRIG3Q6UXM1 1119 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 H2AFVQ71UI9 128 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC187-201ENST00000563590 MMTAG2Q9BU76 263 aaKnown RBP13.76□□□□□ -0.21
CCDC187-201ENST00000563590 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC187-201ENST00000563590 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 AGAP1Q9UPQ3 857 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 NFS1Q9Y697 457 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 MMP10P09238 476 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 SETDB1Q15047 1291 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 TMED8Q6PL24 325 aaPredicted RBP13.76□□□□□ -0.21
CCDC187-201ENST00000563590 C1orf131Q8NDD1 294 aaKnown RBP13.76□□□□□ -0.21
CCDC187-201ENST00000563590 COL4A3BPQ9Y5P4 624 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 MGRN1O60291 552 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 KRT16P08779 473 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 BYSLQ13895 437 aaKnown RBP13.76□□□□□ -0.21
CCDC187-201ENST00000563590 TNIP1Q15025 636 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 TRIP13Q15645 432 aaPredicted RBP13.76□□□□□ -0.21
CCDC187-201ENST00000563590 SLC18A3Q16572 532 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 LONRF1Q17RB8 773 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 TTBK2Q6IQ55 1244 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 NSUN4Q96CB9 384 aaKnown RBP13.76□□□□□ -0.21
CCDC187-201ENST00000563590 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 RASAL2Q9UJF2 1139 aa13.76□□□□□ -0.21
CCDC187-201ENST00000563590 F8VZ95 297 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 CYTH3O43739 400 aa13.75□□□□□ -0.21
CCDC187-201ENST00000563590 GFPT2O94808 682 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms