RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 CYP4A11Q02928 519 aa31.73■■■□□ 2.67
NME3-203ENST00000563367 TAP1Q03518 808 aa31.73■■■□□ 2.67
NME3-203ENST00000563367 CTTNQ14247 550 aaKnown RBP31.73■■■□□ 2.67
NME3-203ENST00000563367 TMEM266Q2M3C6 531 aa31.73■■■□□ 2.67
NME3-203ENST00000563367 TTC38Q5R3I4 469 aa31.73■■■□□ 2.67
NME3-203ENST00000563367 NOC2LQ9Y3T9 749 aaKnown RBP31.73■■■□□ 2.67
NME3-203ENST00000563367 TMOD1P28289 359 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 PAK2Q13177 524 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 DRP2Q13474 957 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 NBR1Q14596 966 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 SPRED2Q7Z698 418 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 RTN4RL1Q86UN2 441 aaPredicted RBP31.72■■■□□ 2.67
NME3-203ENST00000563367 ZNF579Q8NAF0 562 aaKnown RBP31.72■■■□□ 2.67
NME3-203ENST00000563367 LINC01599Q8WXQ3 324 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 OSMRQ99650 979 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 EIF2AK1Q9BQI3 630 aaKnown RBP31.72■■■□□ 2.67
NME3-203ENST00000563367 CERS4Q9HA82 394 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 SMC3Q9UQE7 1217 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 AKT3Q9Y243 479 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 EYSQ5T1H1 3165 aa31.72■■■□□ 2.67
NME3-203ENST00000563367 DKC1O60832 514 aaKnown RBP eCLIP31.71■■■□□ 2.67
NME3-203ENST00000563367 SLITRK3O94933 977 aa31.71■■■□□ 2.67
NME3-203ENST00000563367 UPP2O95045 317 aa31.71■■■□□ 2.67
NME3-203ENST00000563367 FOSL2P15408 326 aa31.71■■■□□ 2.67
NME3-203ENST00000563367 TOB1P50616 345 aaPredicted RBP31.71■■■□□ 2.67
NME3-203ENST00000563367 CRYBB1P53674 252 aaPredicted RBP31.71■■■□□ 2.67
NME3-203ENST00000563367 NPEPPSP55786 919 aa31.71■■■□□ 2.67
NME3-203ENST00000563367 C4orf19Q8IY42 314 aa31.71■■■□□ 2.67
NME3-203ENST00000563367 MAP7D2Q96T17 732 aa31.71■■■□□ 2.67
NME3-203ENST00000563367 ADAMTS10Q9H324 1103 aa31.71■■■□□ 2.67
NME3-203ENST00000563367 TMX1Q9H3N1 280 aa31.71■■■□□ 2.67
NME3-203ENST00000563367 IGKV6-21A0A0C4DH24 114 aa31.7■■■□□ 2.67
NME3-203ENST00000563367 TRAPPC10P48553 1259 aa31.7■■■□□ 2.67
NME3-203ENST00000563367 NLRP11P59045 1033 aaKnown RBP31.7■■■□□ 2.67
NME3-203ENST00000563367 HTRA4P83105 476 aaPredicted RBP31.7■■■□□ 2.67
NME3-203ENST00000563367 HSD17B14Q9BPX1 270 aa31.7■■■□□ 2.67
NME3-203ENST00000563367 ERVK-5Q9HDB9 667 aa31.7■■■□□ 2.67
NME3-203ENST00000563367 CYP26B1Q9NR63 512 aa31.7■■■□□ 2.67
NME3-203ENST00000563367 INSL6Q9Y581 213 aa31.7■■■□□ 2.67
NME3-203ENST00000563367 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.7■■■□□ 2.67
NME3-203ENST00000563367 POTEMA6NI47 508 aa31.69■■■□□ 2.66
NME3-203ENST00000563367 ZBTB39O15060 712 aa31.69■■■□□ 2.66
NME3-203ENST00000563367 ORC2Q13416 577 aaPredicted RBP31.69■■■□□ 2.66
NME3-203ENST00000563367 CUL4AQ13619 759 aa31.69■■■□□ 2.66
NME3-203ENST00000563367 TPH2Q8IWU9 490 aa31.69■■■□□ 2.66
NME3-203ENST00000563367 ZNF668Q96K58 619 aaPredicted RBP31.69■■■□□ 2.66
NME3-203ENST00000563367 ZSWIM4Q9H7M6 989 aa31.69■■■□□ 2.66
NME3-203ENST00000563367 NOL7Q9UMY1 257 aaKnown RBP31.69■■■□□ 2.66
NME3-203ENST00000563367 TRANK1O15050 2925 aa31.68■■■□□ 2.66
NME3-203ENST00000563367 MAFO75444 373 aaPredicted RBP31.68■■■□□ 2.66
NME3-203ENST00000563367 RPS6KA5O75582 802 aa31.68■■■□□ 2.66
NME3-203ENST00000563367 YWHABP31946 246 aaKnown RBP31.68■■■□□ 2.66
NME3-203ENST00000563367 NFX1Q12986 1120 aaKnown RBP31.68■■■□□ 2.66
NME3-203ENST00000563367 ADGRE1Q14246 886 aa31.68■■■□□ 2.66
NME3-203ENST00000563367 MCTP1Q6DN14 999 aa31.68■■■□□ 2.66
NME3-203ENST00000563367 C4orf32Q8N8J7 132 aa31.68■■■□□ 2.66
NME3-203ENST00000563367 ST3GAL5Q9UNP4 418 aa31.68■■■□□ 2.66
NME3-203ENST00000563367 EPOPA6NHQ4 379 aa31.67■■■□□ 2.66
NME3-203ENST00000563367 OR52Z1P0C646 297 aa31.67■■■□□ 2.66
NME3-203ENST00000563367 GPC3P51654 580 aa31.67■■■□□ 2.66
NME3-203ENST00000563367 FAM228AQ86W67 206 aa31.67■■■□□ 2.66
NME3-203ENST00000563367 CEP170P1Q96L14 293 aa31.67■■■□□ 2.66
NME3-203ENST00000563367 FTHL17Q9BXU8 183 aa31.67■■■□□ 2.66
NME3-203ENST00000563367 PCDHB6Q9Y5E3 794 aa31.67■■■□□ 2.66
NME3-203ENST00000563367 NLRC5Q86WI3 1866 aa31.66■■■□□ 2.66
NME3-203ENST00000563367 LINC01553A4QN01 128 aa31.66■■■□□ 2.66
NME3-203ENST00000563367 RFXAPO00287 272 aa31.66■■■□□ 2.66
NME3-203ENST00000563367 TECP42680 631 aa31.66■■■□□ 2.66
NME3-203ENST00000563367 TSPYL2Q9H2G4 693 aaPredicted RBP31.66■■■□□ 2.66
NME3-203ENST00000563367 H3BQV1 296 aa31.65■■■□□ 2.66
NME3-203ENST00000563367 MGEA5O60502 916 aa31.65■■■□□ 2.66
NME3-203ENST00000563367 NEK9Q8TD19 979 aa31.65■■■□□ 2.66
NME3-203ENST00000563367 SP7Q8TDD2 431 aaPredicted RBP31.65■■■□□ 2.66
NME3-203ENST00000563367 ARNTL2Q8WYA1 636 aa31.65■■■□□ 2.66
NME3-203ENST00000563367 GAS2L1Q99501 681 aaPredicted RBP31.65■■■□□ 2.66
NME3-203ENST00000563367 COL4A4P53420 1690 aaPredicted RBP31.64■■■□□ 2.66
NME3-203ENST00000563367 GPR182O15218 404 aa31.64■■■□□ 2.66
NME3-203ENST00000563367 LYPLA2O95372 231 aa31.64■■■□□ 2.66
NME3-203ENST00000563367 OTUD6AQ7L8S5 288 aa31.64■■■□□ 2.66
NME3-203ENST00000563367 ZNF710Q8N1W2 664 aa31.64■■■□□ 2.66
NME3-203ENST00000563367 MAFAQ8NHW3 353 aaPredicted RBP31.64■■■□□ 2.66
NME3-203ENST00000563367 YME1L1Q96TA2 773 aa31.64■■■□□ 2.66
NME3-203ENST00000563367 DHX33Q9H6R0 707 aaKnown RBP31.64■■■□□ 2.66
NME3-203ENST00000563367 SUCLA2Q9P2R7 463 aaPredicted RBP31.64■■■□□ 2.66
NME3-203ENST00000563367 SPATA31C1P0DKV0 1188 aa31.63■■■□□ 2.65
NME3-203ENST00000563367 DNM2P50570 870 aa31.63■■■□□ 2.65
NME3-203ENST00000563367 XKR9Q5GH70 373 aa31.63■■■□□ 2.65
NME3-203ENST00000563367 LARP1BQ659C4 914 aaKnown RBP31.63■■■□□ 2.65
NME3-203ENST00000563367 CRIPAKQ8N1N5 446 aa31.63■■■□□ 2.65
NME3-203ENST00000563367 PRUNE2Q8WUY3 3088 aa31.63■■■□□ 2.65
NME3-203ENST00000563367 COL4A6Q14031 1691 aa31.63■■■□□ 2.65
NME3-203ENST00000563367 A0A087WWV3 80 aa31.62■■■□□ 2.65
NME3-203ENST00000563367 EIF4BP23588 611 aaKnown RBP31.62■■■□□ 2.65
NME3-203ENST00000563367 PTGDRQ13258 359 aa31.62■■■□□ 2.65
NME3-203ENST00000563367 NLRP7Q8WX94 980 aa31.62■■■□□ 2.65
NME3-203ENST00000563367 BMP2KQ9NSY1 1161 aaPredicted RBP31.62■■■□□ 2.65
NME3-203ENST00000563367 PPME1Q9Y570 386 aa31.62■■■□□ 2.65
NME3-203ENST00000563367 DARSP14868 501 aaKnown RBP31.61■■■□□ 2.65
NME3-203ENST00000563367 RFC5P40937 340 aa31.61■■■□□ 2.65
NME3-203ENST00000563367 POLGP54098 1239 aaPredicted RBP31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms