RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ZNF18P17022 549 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 CCNE1P24864 410 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 UBASH3AP57075 661 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 PSMC5P62195 406 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 FMR1Q06787 632 aaKnown RBP eCLIP10.75□□□□□ -0.696e-7■■□□□ 13.9
UBFD1-202ENST00000563366 EHHADHQ08426 723 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 COASYQ13057 564 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 ITGB3BPQ13352 177 aaPredicted RBP10.75□□□□□ -0.69
UBFD1-202ENST00000563366 CDKAL1Q5VV42 579 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 STXBP4Q6ZWJ1 553 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 C4orf19Q8IY42 314 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 TRMT44Q8IYL2 757 aaKnown RBP10.75□□□□□ -0.69
UBFD1-202ENST00000563366 SMYD4Q8IYR2 804 aaPredicted RBP10.75□□□□□ -0.69
UBFD1-202ENST00000563366 ADAMTS19Q8TE59 1207 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 P2RX5Q93086 422 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 TRIM47Q96LD4 638 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 TSG101Q99816 390 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 BHMT2Q9H2M3 363 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 JPH1Q9HDC5 661 aaPredicted RBP10.75□□□□□ -0.69
UBFD1-202ENST00000563366 RGL1Q9NZL6 768 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 SLC9A2Q9UBY0 812 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 GDAQ9Y2T3 454 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 FCF1Q9Y324 198 aaKnown RBP10.75□□□□□ -0.69
UBFD1-202ENST00000563366 PCDHA10Q9Y5I2 948 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 IVNS1ABPQ9Y6Y0 642 aa10.75□□□□□ -0.69
UBFD1-202ENST00000563366 DOCK5Q9H7D0 1870 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 DNAJC25-GNG10A0A024R161 153 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 ARHGEF35A5YM69 484 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 ASB14A6NK59 587 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 DDX39AO00148 427 aaKnown RBP10.74□□□□□ -0.69
UBFD1-202ENST00000563366 AP5Z1O43299 807 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 KCNA2P16389 499 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 MSNP26038 577 aaKnown RBP10.74□□□□□ -0.69
UBFD1-202ENST00000563366 EEF1GP26641 437 aaKnown RBP10.74□□□□□ -0.69
UBFD1-202ENST00000563366 GSDMDP57764 484 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 PTK2Q05397 1052 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 CTTNQ14247 550 aaKnown RBP10.74□□□□□ -0.69
UBFD1-202ENST00000563366 NEDD9Q14511 834 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 FAM110CQ1W6H9 321 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 WDR78Q5VTH9 848 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 PTCRAQ6ISU1 281 aaPredicted RBP10.74□□□□□ -0.69
UBFD1-202ENST00000563366 OTUD6AQ7L8S5 288 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 MYOCDQ8IZQ8 938 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 SLC17A8Q8NDX2 589 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 ZNF526Q8TF50 670 aaPredicted RBP10.74□□□□□ -0.69
UBFD1-202ENST00000563366 BRI3BPQ8WY22 251 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 UIMC1Q96RL1 719 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 THAP9Q9H5L6 903 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 TXNRD2Q9NNW7 524 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 OLFML3Q9NRN5 406 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 ANKEF1Q9NU02 776 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 PKD2L1Q9P0L9 805 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 IFNKQ9P0W0 207 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 MAGEC2Q9UBF1 373 aaPredicted RBP10.74□□□□□ -0.69
UBFD1-202ENST00000563366 UBE4BO95155 1302 aa10.74□□□□□ -0.69
UBFD1-202ENST00000563366 FAM13AO94988 1023 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 CYP2C8P10632 490 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 GUCY2CP25092 1073 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 MAPK4P31152 587 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 ZNF157P51786 506 aaPredicted RBP10.73□□□□□ -0.69
UBFD1-202ENST00000563366 CNTN2Q02246 1040 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 STK4Q13043 487 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 ALCAMQ13740 583 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 GIT2Q14161 759 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 HERC4Q5GLZ8 1057 aaPredicted RBP10.73□□□□□ -0.69
UBFD1-202ENST00000563366 CST9Q5W186 159 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 CENPPQ6IPU0 288 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 RGMBQ6NW40 437 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 MIS18BP1Q6P0N0 1132 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 ZSCAN30Q86W11 494 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 CSGALNACT2Q8N6G5 542 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 KIAA0895Q8NCT3 520 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 HHIPL1Q96JK4 782 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 REEP2Q9BRK0 252 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 XPO4Q9C0E2 1151 aaKnown RBP10.73□□□□□ -0.69
UBFD1-202ENST00000563366 HSD3B7Q9H2F3 369 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 ALG2Q9H553 416 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 SLC39A2Q9NP94 309 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 SLC5A4Q9NY91 659 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 GPSM3Q9Y4H4 160 aa10.73□□□□□ -0.69
UBFD1-202ENST00000563366 EIF3DO15371 548 aaKnown RBP eCLIP10.72□□□□□ -0.69
UBFD1-202ENST00000563366 RGS20O76081 388 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 ATP1A3P13637 1013 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 YWHABP31946 246 aaKnown RBP10.72□□□□□ -0.69
UBFD1-202ENST00000563366 ABCD1P33897 745 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 GGCXP38435 758 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 STX17P56962 302 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 PSMC6P62333 389 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 SREBF2Q12772 1141 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 ARSHQ5FYA8 562 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 RINT1Q6NUQ1 792 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 TTI2Q6NXR4 508 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 SAPCD2Q86UD0 394 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 RASAL3Q86YV0 1011 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 ANKRD13CQ8N6S4 541 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 SMC1BQ8NDV3 1235 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 MORC4Q8TE76 937 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 PIGOQ8TEQ8 1089 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 DRC1Q96MC2 740 aa10.72□□□□□ -0.69
UBFD1-202ENST00000563366 PURBQ96QR8 312 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms