RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TGFB1I1O43294 461 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 PPP1R37O75864 691 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 SNAI1O95863 264 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 CCZ1BP86790 482 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 CCZ1P86791 482 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 ADAM9Q13443 819 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 TTLL4Q14679 1199 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 MAMDC4Q6UXC1 1216 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 DHX37Q8IY37 1157 aaKnown RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 CCDC150Q8NCX0 1101 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 NPLOC4Q8TAT6 608 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 CCDC102AQ96A19 550 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 MAML3Q96JK9 1138 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 DRC1Q96MC2 740 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 KATNBL1Q9H079 304 aa19.9■□□□□ 0.78
COMMD4-208ENST00000563220 TYW1Q9NV66 732 aaKnown RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 DIS3Q9Y2L1 958 aaKnown RBP19.9■□□□□ 0.78
COMMD4-208ENST00000563220 SLC15A5A6NIM6 579 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 TLR2O60603 784 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 OATP04181 439 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 STAT5BP51692 787 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 SOX10P56693 466 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 AFAP1L1Q8TED9 768 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 SCFD2Q8WU76 684 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 NOC4LQ9BVI4 516 aaKnown RBP19.89■□□□□ 0.77
COMMD4-208ENST00000563220 XPNPEP1Q9NQW7 623 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 PCDHB13Q9Y5F0 798 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 ZMYM2Q9UBW7 1377 aa19.89■□□□□ 0.77
COMMD4-208ENST00000563220 PES1O00541 588 aaKnown RBP19.88■□□□□ 0.77
COMMD4-208ENST00000563220 CALUO43852 315 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-208ENST00000563220 DGAT1O75907 488 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 MAPTP10636 758 aaKnown RBP19.88■□□□□ 0.77
COMMD4-208ENST00000563220 SFPQP23246 707 aaKnown RBP eCLIP19.88■□□□□ 0.77
COMMD4-208ENST00000563220 TERF1P54274 439 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 MTERF2Q49AM1 385 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 C17orf53Q8N3J3 647 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-208ENST00000563220 KIAA1524Q8TCG1 905 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 SPATA33Q96N06 139 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 VTA1Q9NP79 307 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 LOXHD1Q8IVV2 1947 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 ITIH6Q6UXX5 1313 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 PLXNB2O15031 1838 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 TMEM88BA6NKF7 163 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 NR2F2P24468 414 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 MORN1Q5T089 497 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 CEP89Q96ST8 783 aa19.88■□□□□ 0.77
COMMD4-208ENST00000563220 NIFKQ9BYG3 293 aaKnown RBP19.88■□□□□ 0.77
COMMD4-208ENST00000563220 MCM3APO60318 1980 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 RBM47A0AV96 593 aaKnown RBP19.87■□□□□ 0.77
COMMD4-208ENST00000563220 K7ENM7 598 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 CETN3O15182 167 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 SKILP12757 684 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 DNM2P50570 870 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 ADKP55263 362 aaKnown RBP19.87■□□□□ 0.77
COMMD4-208ENST00000563220 PEX3P56589 373 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 RBL2Q08999 1139 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 GJC2Q5T442 439 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-208ENST00000563220 FAM160B1Q5W0V3 765 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 STXBP4Q6ZWJ1 553 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 TC2NQ8N9U0 490 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 UBE4BO95155 1302 aa19.87■□□□□ 0.77
COMMD4-208ENST00000563220 NOP56O00567 594 aaKnown RBP19.86■□□□□ 0.77
COMMD4-208ENST00000563220 CLIC2O15247 247 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 LGR5O75473 907 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 TPM2P07951 284 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 TBC1D8BQ0IIM8 1120 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 VWA3BQ502W6 1294 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 BSNDQ8WZ55 320 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 TINF2Q9BSI4 451 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 A0A1W2PQC6 194 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 GNA14O95837 355 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 NR3C1P04150 777 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 TM4SF4P48230 202 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 MARSP56192 900 aaKnown RBP19.86■□□□□ 0.77
COMMD4-208ENST00000563220 SREBF2Q12772 1141 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 MAN2A1Q16706 1144 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 CCDC40Q4G0X9 1142 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 HAUS6Q7Z4H7 955 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 TRIM50Q86XT4 487 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 CPLX3Q8WVH0 158 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 KIFAP3Q92845 792 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 NDST4Q9H3R1 872 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 ST6GALNAC4Q9H4F1 302 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 AZI2Q9H6S1 392 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 ATP6V0A4Q9HBG4 840 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 ZFYVE28Q9HCC9 887 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 NRBP2Q9NSY0 501 aa19.86■□□□□ 0.77
COMMD4-208ENST00000563220 WDR81Q562E7 1941 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 SLC16A4O15374 487 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 GYPCP04921 128 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 ADCYAP1R1P41586 468 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 NPTX2P47972 431 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 NCKAP1LP55160 1127 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 GTF2BQ00403 316 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 ARHGAP1Q07960 439 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 GRM1Q13255 1194 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 CRHR2Q13324 411 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 TARBP2Q15633 366 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms