RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PCDHB6Q9Y5E3 794 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 CAND2O75155 1236 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 CKBP12277 381 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 CCL23P55773 120 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 EPHA7Q15375 998 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 MCTP1Q6DN14 999 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 TAF2Q6P1X5 1199 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 TMEM199Q8N511 208 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 SCLYQ96I15 445 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 FAM167AQ96KS9 214 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 CEP89Q96ST8 783 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 HSD17B14Q9BPX1 270 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 UBE2OQ9C0C9 1292 aaKnown RBP6.96□□□□□ -1.3
CNOT1-204ENST00000563130 TUBE1Q9UJT0 475 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 MTMR6Q9Y217 621 aa6.96□□□□□ -1.3
CNOT1-204ENST00000563130 TRIP12Q14669 1992 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-204ENST00000563130 COL1A2P08123 1366 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 LAD1O00515 517 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 P4HBP07237 508 aaKnown RBP6.95□□□□□ -1.3
CNOT1-204ENST00000563130 CFHP08603 1231 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 OR52Z1P0C646 297 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 SELPP16109 830 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 TXKP42681 527 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 PSMC5P62195 406 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 PRKCEQ02156 737 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 MBTPS1Q14703 1052 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 TARBP2Q15633 366 aaKnown RBP6.95□□□□□ -1.3
CNOT1-204ENST00000563130 ZNF484Q5JVG2 852 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 ZNF618Q5T7W0 954 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 BRAPQ7Z569 592 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 CCDC155Q8N6L0 562 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 TRAPPC12Q8WVT3 735 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 NIFKQ9BYG3 293 aaKnown RBP6.95□□□□□ -1.3
CNOT1-204ENST00000563130 WRAP73Q9P2S5 460 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-204ENST00000563130 PCDHA2Q9Y5H9 948 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 WDR81Q562E7 1941 aa6.95□□□□□ -1.3
CNOT1-204ENST00000563130 STX6O43752 255 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 MARCH6O60337 910 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 SLITRK3O94933 977 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 LYPLA2O95372 231 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 PARNO95453 639 aaKnown RBP6.94□□□□□ -1.3
CNOT1-204ENST00000563130 C22orf31O95567 290 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 CXCL10P02778 98 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 RFC2P35250 354 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 PRPHP41219 470 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 QARSP47897 775 aaKnown RBP6.94□□□□□ -1.3
CNOT1-204ENST00000563130 PPIGQ13427 754 aaKnown RBP eCLIP6.94□□□□□ -1.38e-7■■□□□ 13.9
CNOT1-204ENST00000563130 XKR3Q5GH77 459 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 FAM26DQ5JW98 314 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 C9orf50Q5SZB4 431 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 RASIP1Q5U651 963 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 MTHFD1LQ6UB35 978 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 RUFY4Q6ZNE9 571 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 ANO5Q75V66 913 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 LRRC8DQ7L1W4 858 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 C4orf19Q8IY42 314 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 TDHQ8IZJ6 230 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 LINC01465Q8N7H1 131 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 RETREG2Q8NC44 543 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 BANK1Q8NDB2 785 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 ZBTB10Q96DT7 871 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 IL23AQ9NPF7 189 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 RGL1Q9NZL6 768 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 CEP131Q9UPN4 1083 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 TANC1Q9C0D5 1861 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 IGKV6-21A0A0C4DH24 114 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 SMIM35A0A1B0GVV1 85 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 VPS37CA5D8V6 355 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-204ENST00000563130 NBNO60934 754 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 RPLP2P05387 115 aaKnown RBP6.94□□□□□ -1.3
CNOT1-204ENST00000563130 PFKMP08237 780 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 SPATA31C1P0DKV0 1188 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 KLRC1P26715 233 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 THPOP40225 353 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 TECP42680 631 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 IGBP1P78318 339 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 ATP2C1P98194 919 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-204ENST00000563130 RESTQ13127 1097 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 PDIA5Q14554 519 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 SHHQ15465 462 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 IL17AQ16552 155 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 TMEM240Q5SV17 173 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 NCAPH2Q6IBW4 605 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 FERMT3Q86UX7 667 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 CKAP2LQ8IYA6 745 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 IGSF22Q8N9C0 903 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 NEK9Q8TD19 979 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 EIF2AK1Q9BQI3 630 aaKnown RBP6.94□□□□□ -1.3
CNOT1-204ENST00000563130 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.94□□□□□ -1.37e-18■□□□□ 11.1
CNOT1-204ENST00000563130 LXNQ9BS40 222 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 NRBP2Q9NSY0 501 aa6.94□□□□□ -1.3
CNOT1-204ENST00000563130 MYH9P35579 1960 aaKnown RBP6.94□□□□□ -1.3
CNOT1-204ENST00000563130 KAT6AQ92794 2004 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 RSPH10B2B2RC85 870 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 ACTN4O43707 911 aaKnown RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 DKC1O60832 514 aaKnown RBP eCLIP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 CHRNA1P02708 482 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 RSPH10BP0C881 870 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 ACRP10323 421 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 MGAT3Q09327 533 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms