RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PCDHB15Q9Y5E8 787 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 NUP155O75694 1391 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 ARHGAP10A1A4S6 786 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 BCAR3O75815 825 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 PDE5AO76074 875 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 ZBED1O96006 694 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 MUTP22033 750 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 VSNL1P62760 191 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 TMPRSS15P98073 1019 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 RELQ04864 619 aaPredicted RBP10.12□□□□□ -0.79
CDH1-205ENST00000562836 ANKRD1Q15327 319 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 CAVIN4Q5BKX8 364 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 LRRC8BQ6P9F7 803 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 CCNJLQ8IV13 435 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 COLGALT2Q8IYK4 626 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 NCSTNQ92542 709 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 LPIN3Q9BQK8 851 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 NTPCRQ9BSD7 190 aaKnown RBP10.12□□□□□ -0.79
CDH1-205ENST00000562836 OSBPL3Q9H4L5 887 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
CDH1-205ENST00000562836 BTBD7Q9P203 1132 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 SAP30BPQ9UHR5 308 aaKnown RBP10.12□□□□□ -0.79
CDH1-205ENST00000562836 TMEM5Q9Y2B1 443 aa10.12□□□□□ -0.79
CDH1-205ENST00000562836 MRPS23Q9Y3D9 190 aaKnown RBP10.12□□□□□ -0.79
CDH1-205ENST00000562836 EPN1Q9Y6I3 576 aaPredicted RBP10.12□□□□□ -0.79
CDH1-205ENST00000562836 GOLGA8KD6RF30 607 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 ADAM23O75077 832 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 TOP1P11387 765 aaKnown RBP10.11□□□□□ -0.79
CDH1-205ENST00000562836 KRT13P13646 458 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 HMOX2P30519 316 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 PTGS2P35354 604 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 CBLBQ13191 982 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 TRIM67Q6ZTA4 783 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 FAM83AQ86UY5 434 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 C12orf50Q8NA57 414 aaPredicted RBP10.11□□□□□ -0.79
CDH1-205ENST00000562836 HCAR2Q8TDS4 363 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 FBXL18Q96ME1 805 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 NLRP4Q96MN2 994 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 C12orf10Q9HB07 376 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 TBCCD1Q9NVR7 557 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 STRIP2Q9ULQ0 834 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 SLC8A2Q9UPR5 921 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 PA2G4Q9UQ80 394 aaKnown RBP10.11□□□□□ -0.79
CDH1-205ENST00000562836 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 GREM1O60565 184 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 PBLDP30039 288 aaPredicted RBP10.11□□□□□ -0.79
CDH1-205ENST00000562836 CDC25BP30305 580 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 HOXD13P35453 343 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 MLLT6P55198 1093 aaPredicted RBP10.11□□□□□ -0.79
CDH1-205ENST00000562836 GABREP78334 506 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 SMARCB1Q12824 385 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 RAPGEF1Q13905 1077 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 PTGISQ16647 500 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 KCT2Q8NC54 265 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 CNDP1Q96KN2 507 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 SLITRK6Q9H5Y7 841 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 FAIMQ9NVQ4 179 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 ABI2Q9NYB9 513 aaPredicted RBP10.11□□□□□ -0.79
CDH1-205ENST00000562836 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDH1-205ENST00000562836 EHD2Q9NZN4 543 aa10.11□□□□□ -0.79
CDH1-205ENST00000562836 LAMC1P11047 1609 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 TRPM1Q7Z4N2 1603 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 POTEB2H3BUK9 544 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 RHOXF2BP0C7M4 288 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 CCND1P24385 295 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 IGHMBP2P38935 993 aaKnown RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 STT3AP46977 705 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 MASP1P48740 699 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 NLRP6P59044 892 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 CHMP4BP1P59074 171 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 DNM1Q05193 864 aaKnown RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 RUNX1T1Q06455 604 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 INO80DQ53TQ3 878 aaPredicted RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 SLC10A5Q5PT55 438 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 IL23RQ5VWK5 629 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 PPP1R21Q6ZMI0 780 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 ZNF704Q6ZNC4 412 aaPredicted RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 TOGARAM2Q6ZUX3 1019 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 RAPH1Q70E73 1250 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 ZNF565Q8N9K5 539 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 PANK1Q8TE04 598 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 SAMD11Q96NU1 681 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 SEC62Q99442 399 aaKnown RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 COQ7Q99807 217 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 SH3GL2Q99962 352 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 RHOXF2Q9BQY4 288 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 MMRN2Q9H8L6 949 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 EMC3Q9P0I2 261 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 TRIM10Q9UDY6 481 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 SCOCQ9UIL1 159 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 SNX9Q9Y5X1 595 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 CASQ2O14958 399 aaPredicted RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 BPNT1O95861 308 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 GSTA2P09210 222 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 ATP2A2P16615 1042 aaKnown RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 TCEA1P23193 301 aaKnown RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 ZNF135P52742 658 aaPredicted RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 AKAP17AQ02040 695 aaKnown RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 AP1B1Q10567 949 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms