RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 CENPPQ6IPU0 288 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 STXBP4Q6ZWJ1 553 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 TLK2Q86UE8 772 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 MYOCDQ8IZQ8 938 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 CD99L2Q8TCZ2 262 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 NELFBQ8WX92 580 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 GLG1Q92896 1179 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 MED15Q96RN5 788 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 FIZ1Q96SL8 496 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 ST6GALNAC4Q9H4F1 302 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 SLC39A2Q9NP94 309 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 KCNG1Q9UIX4 513 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 TMEM150BA6NC51 233 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 DUSP11O75319 330 aaKnown RBP15.41■□□□□ 0.06
CLK3-209ENST00000562670 HMGCRP04035 888 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 PLS3P13797 630 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 ZNF18P17022 549 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 ABCD1P33897 745 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 CPT1AP50416 773 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
CLK3-209ENST00000562670 LRRC63Q05C16 580 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 RAD51AP2Q09MP3 1159 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 PLCB4Q15147 1175 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 MAP3K21Q5TCX8 1036 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 TTI2Q6NXR4 508 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 SLC7A3Q8WY07 619 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 P2RX5Q93086 422 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 JPH2Q9BR39 696 aaPredicted RBP15.41■□□□□ 0.06
CLK3-209ENST00000562670 C16orf70Q9BSU1 422 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 UPF3AQ9H1J1 476 aaKnown RBP15.41■□□□□ 0.06
CLK3-209ENST00000562670 HSD3B7Q9H2F3 369 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 CTNND2Q9UQB3 1225 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 NFE2L3Q9Y4A8 694 aa15.41■□□□□ 0.06
CLK3-209ENST00000562670 SEPT4O43236 478 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 PPP1R37O75864 691 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 F2P00734 622 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 EMC2Q15006 297 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 ZCWPW2Q504Y3 356 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 BRDTQ58F21 947 aaPredicted RBP15.4■□□□□ 0.06
CLK3-209ENST00000562670 KLHL10Q6JEL2 608 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 TRIM50Q86XT4 487 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 FAM178BQ8IXR5 827 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 TRPV1Q8NER1 839 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 NOC3LQ8WTT2 800 aaKnown RBP15.4■□□□□ 0.06
CLK3-209ENST00000562670 ZNF296Q8WUU4 475 aaPredicted RBP15.4■□□□□ 0.06
CLK3-209ENST00000562670 SCFD1Q8WVM8 642 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 SPIRE2Q8WWL2 714 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 HPS3Q969F9 1004 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 HVCN1Q96D96 273 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 STRA6Q9BX79 667 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 XPNPEP1Q9NQW7 623 aa15.4■□□□□ 0.06
CLK3-209ENST00000562670 IGKV6-21A0A0C4DH24 114 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 ZBTB42B2RXF5 422 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 KPNA6O60684 536 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 MAFO75444 373 aaPredicted RBP15.39■□□□□ 0.05
CLK3-209ENST00000562670 ECM2O94769 699 aaPredicted RBP15.39■□□□□ 0.05
CLK3-209ENST00000562670 POLGP54098 1239 aaPredicted RBP15.39■□□□□ 0.05
CLK3-209ENST00000562670 NCKAP1LP55160 1127 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 GJA9P57773 515 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 C1QTNF8P60827 252 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 MTERF2Q49AM1 385 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 ZNF484Q5JVG2 852 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 PRAMEF19Q5SWL8 479 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 ODR4Q5SWX8 454 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 CDKAL1Q5VV42 579 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 MYCT1Q8N699 235 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 SLAIN1Q8ND83 568 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 ZNF507Q8TCN5 953 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 ANP32BQ92688 251 aaKnown RBP15.39■□□□□ 0.05
CLK3-209ENST00000562670 NTPCRQ9BSD7 190 aaKnown RBP15.39■□□□□ 0.05
CLK3-209ENST00000562670 BEGAINQ9BUH8 593 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 AP5M1Q9H0R1 490 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 ZHX3Q9H4I2 956 aa15.39■□□□□ 0.05
CLK3-209ENST00000562670 MRPL44Q9H9J2 332 aaKnown RBP15.39■□□□□ 0.05
CLK3-209ENST00000562670 MYH11P35749 1972 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 H0YCG3 227 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 ADCY3O60266 1144 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 SPAG1Q07617 926 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 CACNB2Q08289 660 aaPredicted RBP15.38■□□□□ 0.05
CLK3-209ENST00000562670 DMP1Q13316 513 aaPredicted RBP15.38■□□□□ 0.05
CLK3-209ENST00000562670 NFIL3Q16649 462 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 EDRF1Q3B7T1 1238 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 ZNF720Q7Z2F6 126 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 ZC3H3Q8IXZ2 948 aaKnown RBP15.38■□□□□ 0.05
CLK3-209ENST00000562670 TMEM174Q8WUU8 243 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 FGFBP2Q9BYJ0 223 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 KCTD10Q9H3F6 313 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 THAP9Q9H5L6 903 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 MAPK8IP1Q9UQF2 711 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 PCDHB13Q9Y5F0 798 aa15.38■□□□□ 0.05
CLK3-209ENST00000562670 H3BRB1 525 aa15.37■□□□□ 0.05
CLK3-209ENST00000562670 DYNC1LI2O43237 492 aaPredicted RBP15.37■□□□□ 0.05
CLK3-209ENST00000562670 GCNT3O95395 438 aa15.37■□□□□ 0.05
CLK3-209ENST00000562670 PTGS1P23219 599 aa15.37■□□□□ 0.05
CLK3-209ENST00000562670 MARK3P27448 753 aa15.37■□□□□ 0.05
CLK3-209ENST00000562670 CST5P28325 142 aaPredicted RBP15.37■□□□□ 0.05
CLK3-209ENST00000562670 ARL2P36404 184 aa15.37■□□□□ 0.05
CLK3-209ENST00000562670 CASP5P51878 434 aa15.37■□□□□ 0.05
CLK3-209ENST00000562670 TBC1D8BQ0IIM8 1120 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms