RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 GLYCTKQ8IVS8 523 aa15.18■□□□□ 0.02
VPS9D1-202ENST00000561976 SLFN12Q8IYM2 578 aa15.18■□□□□ 0.02
VPS9D1-202ENST00000561976 ERMNQ8TAM6 284 aa15.18■□□□□ 0.02
VPS9D1-202ENST00000561976 SLC35G2Q8TBE7 412 aa15.18■□□□□ 0.02
VPS9D1-202ENST00000561976 CHMP6Q96FZ7 201 aa15.18■□□□□ 0.02
VPS9D1-202ENST00000561976 SEPT11Q9NVA2 429 aaKnown RBP15.18■□□□□ 0.02
VPS9D1-202ENST00000561976 MYH7BA7E2Y1 1941 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 GOLGA6L10A0A0M3HER8 536 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 SPDYE3A6NKU9 549 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 SMIM23A6NLE4 172 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 RGL2O15211 777 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 NPEPPSP55786 919 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 JAM2P57087 298 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 BYSLQ13895 437 aaKnown RBP15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 NEDD9Q14511 834 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 PRR16Q569H4 304 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 CTNNBL1Q8WYA6 563 aaPredicted RBP15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 SLC35C1Q96A29 364 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 HVCN1Q96D96 273 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 SGSM3Q96HU1 749 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 XPO6Q96QU8 1125 aaKnown RBP15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 ANO3Q9BYT9 981 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 KCNMB3Q9NPA1 279 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 TYW1Q9NV66 732 aaKnown RBP15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 DAAM1Q9Y4D1 1078 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 RSPH10B2B2RC85 870 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 EVI5O60447 810 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 PPFIA2O75334 1257 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 RSPH10BP0C881 870 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 DRD4P21917 467 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 GPATCH4Q5T3I0 446 aaKnown RBP15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 LNX1Q8TBB1 728 aaPredicted RBP15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 SEC14L1Q92503 715 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 PPP1R9AQ9ULJ8 1098 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 NENFQ9UMX5 172 aa15.17■□□□□ 0.02
VPS9D1-202ENST00000561976 ATAD5Q96QE3 1844 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 COL5A3P25940 1745 aaPredicted RBP15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 TBCAO75347 108 aaKnown RBP15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 PLTPP55058 493 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 ZNF211Q13398 564 aaPredicted RBP15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 PREPLQ4J6C6 727 aaPredicted RBP15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 CCDC50Q8IVM0 306 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 MXD3Q9BW11 206 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 PCDHA1Q9Y5I3 950 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 SHBGP04278 402 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 LMNB1P20700 586 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 NF2P35240 595 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 CYP4A11Q02928 519 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 EPM2AIP1Q7L775 607 aaPredicted RBP15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 SYT2Q8N9I0 419 aaPredicted RBP15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 CCDC197Q8NCU1 140 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 RFFLQ8WZ73 363 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 GLG1Q92896 1179 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 TLCD1Q96CP7 247 aa15.16■□□□□ 0.02
VPS9D1-202ENST00000561976 PLIN4Q96Q06 1357 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 KRT13P13646 458 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 CHN1P15882 459 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 PTENP60484 403 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 POU5F1Q01860 360 aaKnown RBP15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 KCNA1Q09470 495 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 ERMARDQ5T6L9 678 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 DENND2CQ68D51 928 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 CCT6BQ92526 530 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 CDK5RAP2Q96SN8 1893 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 NAP1L3Q99457 506 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 ERP44Q9BS26 406 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 FAM129AQ9BZQ8 928 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 SNX24Q9Y343 169 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 ASTN1O14525 1302 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 IGKV6D-41A0A0C4DH26 115 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 SFI1A8K8P3 1242 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 F8W031 263 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 SLC16A3O15427 465 aaKnown RBP15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 SLC26A4O43511 780 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 MMEP08473 750 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 SOX5P35711 763 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 PMS2P54278 862 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 QRICH1Q2TAL8 776 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 LACTB2Q53H82 288 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 MSL1Q68DK7 614 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 ANKS4BQ8N8V4 417 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 NEK9Q8TD19 979 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 P3H4Q92791 437 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 RPGRQ92834 1020 aaKnown RBP15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 FAM163AQ96GL9 167 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 BHMT2Q9H2M3 363 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 BCAS3Q9H6U6 928 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 GGA1Q9UJY5 639 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 ODF2LQ9ULJ1 636 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 TPX2Q9ULW0 747 aaKnown RBP15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 DAGLAQ9Y4D2 1042 aa15.15■□□□□ 0.02
VPS9D1-202ENST00000561976 SBF2Q86WG5 1849 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 PPP1R12BO60237 982 aaPredicted RBP15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 GABPAQ06546 454 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 DCAF12L1Q5VU92 463 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 RPAINQ86UA6 219 aa15.14■□□□□ 0.01
VPS9D1-202ENST00000561976 ARHGEF1Q92888 912 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms